Variant report

Variant rs12440495
Chromosome Location chr15:56451569-56451570
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56424800-56453800 Weak transcription Brain Substantia Nigra brain
2 chr15:56433800-56464000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr15:56435200-56458800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr15:56435400-56461000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr15:56435400-56462400 Weak transcription Fetal Thymus thymus
6 chr15:56435400-56465200 Weak transcription Thymus Thymus
7 chr15:56435800-56454000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr15:56436000-56458000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr15:56436400-56455800 Weak transcription Liver Liver
10 chr15:56436600-56458800 Weak transcription Primary B cells from cord blood blood
11 chr15:56441000-56453200 Weak transcription A549 lung
12 chr15:56441000-56461400 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr15:56442000-56457200 Weak transcription HMEC breast
14 chr15:56442000-56458000 Weak transcription HepG2 liver
15 chr15:56442000-56462600 Weak transcription HSMM muscle
16 chr15:56442200-56457200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr15:56442600-56470600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr15:56442800-56454400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr15:56442800-56462600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr15:56443200-56452200 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr15:56443200-56462600 Weak transcription Duodenum Mucosa Duodenum
22 chr15:56446600-56468400 Weak transcription Fetal Lung lung
23 chr15:56447600-56457800 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr15:56447800-56455800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr15:56448000-56452200 Weak transcription Primary T cells from cord blood blood
26 chr15:56448000-56456400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr15:56448200-56458000 Weak transcription Primary T cells fromperipheralblood blood
28 chr15:56448400-56460200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr15:56448600-56457800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr15:56449400-56458400 Weak transcription Dnd41 blood
31 chr15:56449600-56453200 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr15:56450200-56452400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr15:56450800-56452200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr15:56450800-56455200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr15:56451000-56452800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr15:56451200-56451600 ZNF genes & repeats GM12878-XiMat blood
37 chr15:56451200-56452200 Strong transcription Primary hematopoietic stem cells blood
38 chr15:56451200-56452400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
39 chr15:56451200-56458200 Weak transcription Primary B cells from peripheral blood blood
40 chr15:56451400-56451600 Enhancers Skeletal Muscle Male skeletal muscle
41 chr15:56451400-56452200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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