Variant report

Variant rs12440898
Chromosome Location chr15:56456221-56456222
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56433800-56464000 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr15:56435200-56458800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr15:56435400-56461000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr15:56435400-56462400 Weak transcription Fetal Thymus thymus
5 chr15:56435400-56465200 Weak transcription Thymus Thymus
6 chr15:56436000-56458000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr15:56436600-56458800 Weak transcription Primary B cells from cord blood blood
8 chr15:56441000-56461400 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr15:56442000-56457200 Weak transcription HMEC breast
10 chr15:56442000-56458000 Weak transcription HepG2 liver
11 chr15:56442000-56462600 Weak transcription HSMM muscle
12 chr15:56442200-56457200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr15:56442600-56470600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr15:56442800-56462600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:56443200-56462600 Weak transcription Duodenum Mucosa Duodenum
16 chr15:56446600-56468400 Weak transcription Fetal Lung lung
17 chr15:56447600-56457800 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr15:56448000-56456400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr15:56448200-56458000 Weak transcription Primary T cells fromperipheralblood blood
20 chr15:56448400-56460200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr15:56448600-56457800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr15:56449400-56458400 Weak transcription Dnd41 blood
23 chr15:56451200-56458200 Weak transcription Primary B cells from peripheral blood blood
24 chr15:56452200-56457000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr15:56452200-56460800 Weak transcription Primary hematopoietic stem cells blood
26 chr15:56452400-56457800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr15:56452400-56458800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr15:56452400-56458800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr15:56452800-56457000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr15:56453000-56460800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr15:56453000-56463200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr15:56453000-56479600 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr15:56453200-56462000 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr15:56453200-56465000 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr15:56453400-56457600 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr15:56453400-56463400 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr15:56453600-56457600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr15:56453600-56515000 Weak transcription NHLF lung
39 chr15:56453800-56463000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr15:56454000-56462800 Weak transcription Brain Germinal Matrix brain
41 chr15:56454000-56464600 Weak transcription H1 Cell Line embryonic stem cell
42 chr15:56454200-56457800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr15:56454200-56460600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr15:56454200-56465000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr15:56454400-56456400 Weak transcription Primary T cells from cord blood blood
46 chr15:56454400-56457200 Weak transcription NHEK skin
47 chr15:56454400-56462600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr15:56454400-56462600 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr15:56454400-56462600 Weak transcription A549 lung
50 chr15:56454400-56463000 Weak transcription HUES6 Cell Line embryonic stem cell

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