Variant report

Variant	rs12459271
Chromosome Location	chr19:43361564-43361565
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr19:43361460-43361610	HCFaa	heart:	n/a	n/a
2	CTCF	chr19:43361440-43361590	GM12878	blood:	n/a	n/a
3	CTCF	chr19:43361560-43361710	AG04449	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
4	CTCF	chr19:43361460-43361610	SK-N-SH_RA	brain:	n/a	n/a
5	CTCF	chr19:43361460-43361610	GM12864	blood:	n/a	n/a
6	CTCF	chr19:43361480-43361630	BE2_C	brain:	n/a	chr19:43361609-43361630 chr19:43361620-43361629 chr19:43361617-43361627
7	MYC	chr19:43361548-43361766	MCF10A-Er-Src	breast:	n/a	n/a
8	SPI1	chr19:43361504-43361686	K562	blood:	n/a	n/a
9	CTCF	chr19:43361440-43361757	K562	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
10	RAD21	chr19:43361318-43361827	HCT-116	colon:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
11	CTCF	chr19:43361343-43361764	MCF-7	breast:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
12	CTCF	chr19:43361488-43361744	GM19240	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
13	CTCF	chr19:43361472-43361781	GM13977	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
14	CTCF	chr19:43361460-43361610	AoAF	blood vessel:	n/a	n/a
15	CTCF	chr19:43361278-43361786	K562	blood:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
16	CTCF	chr19:43361291-43361921	A549	lung:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
17	FOSL2	chr19:43361413-43361765	HepG2	liver:	n/a	n/a
18	CTCF	chr19:43361248-43361913	K562	blood:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
19	CTCF	chr19:43361460-43361610	HA-sp	spinal cord:	n/a	n/a
20	CTCF	chr19:43361460-43361750	GM12875	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
21	RAD21	chr19:43361440-43361692	HepG2	liver:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
22	CTCF	chr19:43361460-43361610	HL-60	blood:	n/a	n/a
23	CTCF	chr19:43361485-43361758	GM12892	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
24	CTCF	chr19:43361500-43361650	BE2_C	brain:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
25	CTCF	chr19:43361460-43361610	BJ	skin:	n/a	n/a
26	CTCF	chr19:43361460-43361610	HFF	foreskin:	n/a	n/a
27	CTCF	chr19:43361480-43361630	HVMF	connective:	n/a	chr19:43361609-43361630 chr19:43361620-43361629 chr19:43361617-43361627
28	CTCF	chr19:43361520-43361725	Pancreas_OC	pancreas:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
29	CTCF	chr19:43361537-43361738	GM10266	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
30	RAD21	chr19:43361439-43361707	SK-N-SH_RA	brain:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
31	CTCF	chr19:43361440-43361590	GM12864	blood:	n/a	n/a
32	CTCF	chr19:43361562-43361726	Spleen_OC	spleen:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
33	CTCF	chr19:43361324-43361789	NHEK	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
34	RAD21	chr19:43361437-43361725	H1-hESC	embryonic stem cell:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
35	CTCF	chr19:43361460-43361610	HMF	breast:	n/a	n/a
36	BATF	chr19:43361555-43361754	GM12878	blood:	n/a	n/a
37	CTCF	chr19:43361552-43361724	HepG2	liver:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
38	CTCF	chr19:43361460-43361610	GM12865	blood:	n/a	n/a
39	RAD21	chr19:43361534-43361710	H1-hESC	embryonic stem cell:	n/a	chr19:43361618-43361627 chr19:43361612-43361631
40	ZNF143	chr19:43361531-43361732	GM12878	blood:	n/a	n/a
41	CTCF	chr19:43361243-43361991	HCT-116	colon:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
42	CTCF	chr19:43361460-43361610	NHEK	skin:	n/a	n/a
43	CTCF	chr19:43361535-43361735	ProgFib	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
44	CTCF	chr19:43361460-43361610	AG09319	gingival:	n/a	n/a
45	CTCF	chr19:43361460-43361610	GM06990	blood:	n/a	n/a
46	SMC3	chr19:43361239-43361864	SK-N-SH	brain:	n/a	chr19:43361452-43361459 chr19:43361616-43361630
47	CTCF	chr19:43361501-43361747	GM12878	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
48	EBF1	chr19:43361468-43361751	GM12878	blood:	n/a	n/a
49	CTCF	chr19:43361460-43361610	HEK293	kidney:	n/a	n/a
50	CTCF	chr19:43361460-43361610	HUVEC	blood vessel:	n/a	n/a

Variant related genes	Relation type
PSG8	TF binding region
PSG10P	TF binding region

Extended variants
information (count: 684 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:197)

rs_ID	r²[population]
rs10401410	0.81[ASN][1000 genomes]
rs10401981	0.91[ASN][1000 genomes]
rs10402669	0.81[EUR][1000 genomes]
rs10403207	0.95[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10403506	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10403637	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10404617	0.94[ASN][1000 genomes]
rs10405119	0.94[ASN][1000 genomes]
rs10405156	0.89[ASN][1000 genomes]
rs10405430	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10405854	0.88[ASN][1000 genomes]
rs10406210	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10408171	0.93[ASN][1000 genomes]
rs10408392	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10409077	0.91[ASN][1000 genomes]
rs10409273	0.96[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs10409602	0.91[ASN][1000 genomes]
rs10410760	0.82[ASN][1000 genomes]
rs10411688	0.94[ASN][1000 genomes]
rs10412183	0.93[ASN][1000 genomes]
rs10413259	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10413496	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10413609	0.93[ASN][1000 genomes]
rs10413886	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10414325	0.88[ASN][1000 genomes]
rs10414577	0.85[ASN][1000 genomes]
rs10414706	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10415444	0.91[ASN][1000 genomes]
rs10415640	0.90[ASN][1000 genomes]
rs10415903	0.80[ASN][1000 genomes]
rs10416723	0.87[ASN][1000 genomes]
rs10417214	0.89[ASN][1000 genomes]
rs10417269	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10417364	0.94[ASN][1000 genomes]
rs10417672	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10418772	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10419277	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10420220	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10420788	0.81[ASN][1000 genomes]
rs10421345	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10421663	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10421724	0.91[ASN][1000 genomes]
rs10421738	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10421952	0.85[ASN][1000 genomes]
rs10422367	0.85[ASN][1000 genomes]
rs10422417	0.94[ASN][1000 genomes]
rs10422560	0.82[ASN][1000 genomes]
rs10422635	0.96[ASN][1000 genomes]
rs10423067	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10423122	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10423732	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10423757	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10424257	0.95[ASN][1000 genomes]
rs10424427	0.93[ASN][1000 genomes]
rs10425207	0.81[EUR][1000 genomes]
rs10426517	0.94[ASN][1000 genomes]
rs10426689	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10426946	0.92[ASN][1000 genomes]
rs10427103	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1058817	0.97[ASN][1000 genomes]
rs1064491	0.97[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1065178	0.87[ASN][1000 genomes]
rs11083666	0.91[ASN][1000 genomes]
rs1141653	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12104262	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12459171	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12459252	0.92[ASN][1000 genomes]
rs12459291	0.81[ASN][1000 genomes]
rs12459344	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12460710	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12460750	0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12460851	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12461039	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12462092	0.91[ASN][1000 genomes]
rs12462903	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12463041	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12463071	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13344415	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13346001	0.95[AFR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13346193	0.93[ASN][1000 genomes]
rs13346199	0.91[ASN][1000 genomes]
rs1811214	0.94[ASN][1000 genomes]
rs1962302	0.89[ASN][1000 genomes]
rs1962303	0.91[ASN][1000 genomes]
rs1966371	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1985620	0.95[ASN][1000 genomes]
rs1985621	0.96[ASN][1000 genomes]
rs1987627	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1987696	0.94[AFR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1987697	0.97[AFR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1987698	0.94[ASN][1000 genomes]
rs1988065	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1989986	0.81[ASN][1000 genomes]
rs2041107	0.88[ASN][1000 genomes]
rs2041108	0.87[ASN][1000 genomes]
rs2074856	0.87[ASN][1000 genomes]
rs2074857	0.87[ASN][1000 genomes]
rs2108488	0.92[ASN][1000 genomes]
rs2108526	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2353116	0.93[AFR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2353125	0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2354271	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28374299	0.95[AFR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28376612	0.82[ASN][1000 genomes]
rs28406280	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs28409818	0.89[ASN][1000 genomes]
rs28412804	0.92[ASN][1000 genomes]
rs28435082	0.89[ASN][1000 genomes]
rs28489113	0.81[ASN][1000 genomes]
rs28579274	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28587255	0.83[ASN][1000 genomes]
rs28589310	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28604981	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28624202	0.89[ASN][1000 genomes]
rs28740886	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs28790593	0.91[ASN][1000 genomes]
rs2883096	0.83[ASN][1000 genomes]
rs3198831	0.89[ASN][1000 genomes]
rs3199707	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36072603	0.81[ASN][1000 genomes]
rs3827010	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4075680	0.81[ASN][1000 genomes]
rs4263043	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4366810	0.96[ASN][1000 genomes]
rs4380148	0.92[ASN][1000 genomes]
rs4430863	0.92[ASN][1000 genomes]
rs4500870	0.85[ASN][1000 genomes]
rs4520942	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4536565	0.90[ASN][1000 genomes]
rs4538113	0.85[ASN][1000 genomes]
rs4538114	0.96[ASN][1000 genomes]
rs4621087	0.94[ASN][1000 genomes]
rs4621088	0.94[ASN][1000 genomes]
rs4624304	0.87[ASN][1000 genomes]
rs4633837	0.87[EUR][1000 genomes]
rs4643451	0.80[ASN][1000 genomes]
rs55698945	0.81[ASN][1000 genomes]
rs55771336	0.81[ASN][1000 genomes]
rs55996035	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56338246	0.86[EUR][1000 genomes]
rs57201124	0.81[ASN][1000 genomes]
rs59774608	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62110890	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62110892	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62110909	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62110911	0.90[ASN][1000 genomes]
rs62110917	0.84[ASN][1000 genomes]
rs62112961	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62112984	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62112987	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62112988	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62112989	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62112990	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62112992	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62113064	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62113065	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62113068	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62113069	0.81[EUR][1000 genomes]
rs6509034	0.96[ASN][1000 genomes]
rs6509037	0.85[ASN][1000 genomes]
rs6509038	0.86[ASN][1000 genomes]
rs6509040	0.97[ASN][1000 genomes]
rs7248431	0.93[ASN][1000 genomes]
rs7250910	0.95[ASN][1000 genomes]
rs7251720	0.92[ASN][1000 genomes]
rs7251938	0.94[ASN][1000 genomes]
rs7253121	0.96[ASN][1000 genomes]
rs7254080	0.96[ASN][1000 genomes]
rs7257158	0.81[EUR][1000 genomes]
rs7258262	0.93[ASN][1000 genomes]
rs73035282	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs758095	0.89[ASN][1000 genomes]
rs8100095	0.89[ASN][1000 genomes]
rs8100982	0.89[ASN][1000 genomes]
rs8101010	0.98[ASN][1000 genomes]
rs8102265	0.92[ASN][1000 genomes]
rs8103585	0.93[ASN][1000 genomes]
rs8103739	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8104427	0.93[ASN][1000 genomes]
rs8105636	0.91[ASN][1000 genomes]
rs8105685	0.87[ASN][1000 genomes]
rs8107681	0.91[ASN][1000 genomes]
rs8108042	0.93[ASN][1000 genomes]
rs8108570	0.84[ASN][1000 genomes]
rs8110746	0.89[ASN][1000 genomes]
rs8110938	0.89[ASN][1000 genomes]
rs8111114	0.95[ASN][1000 genomes]
rs8111438	0.81[ASN][1000 genomes]
rs8111762	0.91[ASN][1000 genomes]
rs8112263	0.81[ASN][1000 genomes]
rs9304612	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9304613	0.83[ASN][1000 genomes]
rs9304614	0.98[ASN][1000 genomes]
rs9304615	0.94[ASN][1000 genomes]
rs9304616	0.98[ASN][1000 genomes]
rs9676609	0.95[ASN][1000 genomes]
rs9807814	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:487 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422471	chr19:42733141-43669485	Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
2	esv2422468	chr19:42991289-43669027	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	esv2758501	chr19:43042747-43899053	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
4	esv2758763	chr19:43042747-43899053	Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
5	nsv428023	chr19:43042747-43899053	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
6	esv2422227	chr19:43059426-43669485	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
7	nsv1056270	chr19:43139043-43542819	Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
8	nsv544007	chr19:43141984-43529861	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv1061798	chr19:43141984-43741311	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
10	nsv544008	chr19:43141984-43741311	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
11	esv2754239	chr19:43145417-43559330	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
12	esv1845826	chr19:43152829-43454902	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
13	esv2757697	chr19:43164418-43870887	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
14	nsv1055872	chr19:43173614-44075193	Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
15	nsv544009	chr19:43173614-44075193	Enhancers ZNF genes & repeats Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
16	nsv544010	chr19:43173814-43584478	Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
17	nsv544011	chr19:43173814-43741311	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
18	esv2751786	chr19:43198035-43685930	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
19	nsv516973	chr19:43202770-43866823	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
20	nsv869916	chr19:43203105-43584433	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
21	nsv869571	chr19:43203105-43802656	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
22	nsv869565	chr19:43203105-43810421	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
23	nsv963056	chr19:43203249-43798708	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
24	nsv9730	chr19:43203459-43802656	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
25	esv1812820	chr19:43203937-43803388	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
26	esv1808074	chr19:43214215-43805847	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
27	esv1813803	chr19:43214415-43805651	Active TSS ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
28	esv2763121	chr19:43215328-43846394	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
29	nsv833835	chr19:43220207-43423373	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
30	nsv428364	chr19:43220207-43435444	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
31	nsv1056871	chr19:43224550-43361690	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
32	nsv1055747	chr19:43224550-43362640	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
33	nsv1065465	chr19:43224550-43368923	Enhancers Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
34	nsv1055726	chr19:43224550-43370644	Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
35	esv1846846	chr19:43225921-43774853	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
36	esv1805299	chr19:43227458-43790318	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
37	nsv1064932	chr19:43228125-43362640	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
38	nsv1059355	chr19:43228125-43370644	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
39	nsv1060654	chr19:43228125-43451808	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
40	nsv911809	chr19:43233048-43374601	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
41	nsv911810	chr19:43233048-43629573	Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
42	esv2760524	chr19:43237611-43805328	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
43	nsv1063131	chr19:43237764-43362640	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
44	nsv1055408	chr19:43237764-43377275	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
45	nsv1061598	chr19:43237764-43415712	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
46	esv34661	chr19:43240379-43673190	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
47	esv2751787	chr19:43240379-43685930	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
48	esv2751788	chr19:43240379-43711592	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
49	nsv432049	chr19:43240379-43711592	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
50	esv2751789	chr19:43240379-43731159	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:43357600-43361600	Weak transcription	NHEK	skin
2	chr19:43357600-43361800	Weak transcription	A549	lung
3	chr19:43357600-43378800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr19:43358200-43361800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr19:43358600-43361600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr19:43359800-43362000	Enhancers	Placenta	Placenta
7	chr19:43360000-43362000	Enhancers	Brain Inferior Temporal Lobe	brain
8	chr19:43360200-43361600	Enhancers	Brain Anterior Caudate	brain
9	chr19:43360200-43362000	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr19:43360800-43361600	Weak transcription	Spleen	Spleen
11	chr19:43361400-43361800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr19:43361400-43362000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr19:43361400-43362000	Enhancers	Brain Substantia Nigra	brain

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