The 2.0 version of rSNPBase

Variant report

Variant rs12483798
Chromosome Location chr22:32193330-32193331
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32150800-32212800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:32151000-32210800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr22:32151400-32217400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr22:32159600-32207600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr22:32164600-32196000 Weak transcription Hela-S3 cervix
6 chr22:32165000-32197600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr22:32171200-32195000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr22:32171200-32204200 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr22:32172200-32254400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr22:32172800-32221000 Strong transcription Fetal Adrenal Gland Adrenal Gland
11 chr22:32175200-32213800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr22:32175400-32193400 Weak transcription HSMMtube muscle
13 chr22:32175800-32202000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr22:32176000-32194600 Weak transcription Fetal Brain Male brain
15 chr22:32176000-32198600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr22:32176600-32193600 Weak transcription H9 Cell Line embryonic stem cell
17 chr22:32176800-32193800 Weak transcription HSMM muscle
18 chr22:32176800-32196200 Weak transcription NHLF lung
19 chr22:32176800-32198800 Weak transcription A549 lung
20 chr22:32176800-32200000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr22:32177000-32193600 Weak transcription Pancreas Pancrea
22 chr22:32177000-32194600 Weak transcription Colonic Mucosa Colon
23 chr22:32178200-32199600 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr22:32179200-32193600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr22:32179400-32193400 Weak transcription Gastric stomach
26 chr22:32179400-32193600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr22:32179400-32193600 Weak transcription Rectal Smooth Muscle rectum
28 chr22:32179600-32193400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr22:32179600-32193400 Weak transcription Small Intestine intestine
30 chr22:32179600-32193600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr22:32179600-32193600 Weak transcription Aorta Aorta
32 chr22:32179600-32193800 Weak transcription Placenta Amnion Placenta Amnion
33 chr22:32180000-32198600 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr22:32181400-32193400 Weak transcription Brain Substantia Nigra brain
35 chr22:32181800-32194400 Weak transcription NH-A brain
36 chr22:32181800-32196200 Weak transcription HMEC breast
37 chr22:32181800-32198600 Weak transcription NHDF-Ad bronchial
38 chr22:32182000-32193400 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr22:32182000-32193600 Weak transcription Osteobl bone
40 chr22:32182200-32209800 Strong transcription Fetal Stomach stomach
41 chr22:32183400-32193400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr22:32183400-32193600 Weak transcription Left Ventricle heart
43 chr22:32183600-32193400 Weak transcription H1 Cell Line embryonic stem cell
44 chr22:32183600-32193400 Weak transcription Psoas Muscle Psoas
45 chr22:32184400-32193400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr22:32186600-32194000 Weak transcription HepG2 liver
47 chr22:32186600-32196200 Weak transcription NHEK skin
48 chr22:32186600-32198400 Weak transcription K562 blood
49 chr22:32186800-32193400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr22:32187400-32198800 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015