The 2.0 version of rSNPBase

Variant report

Variant rs12484163
Chromosome Location chr22:32316597-32316598
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32302000-32324800 Weak transcription Fetal Thymus thymus
2 chr22:32302400-32322600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr22:32303200-32318400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr22:32304400-32318000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr22:32304400-32319000 Weak transcription Fetal Lung lung
6 chr22:32304400-32339600 Weak transcription Brain Germinal Matrix brain
7 chr22:32305200-32321600 Weak transcription Fetal Brain Female brain
8 chr22:32306800-32318000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr22:32306800-32318600 Weak transcription Primary T cells from cord blood blood
10 chr22:32307600-32318600 Weak transcription Liver Liver
11 chr22:32310400-32318400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr22:32311600-32320000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr22:32313200-32317200 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr22:32313400-32321400 Weak transcription Pancreas Pancrea
15 chr22:32313600-32318200 Weak transcription Primary hematopoietic stem cells blood
16 chr22:32313800-32317200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr22:32313800-32320800 Enhancers Primary monocytes fromperipheralblood blood
18 chr22:32314000-32318600 Weak transcription GM12878-XiMat blood
19 chr22:32314200-32318400 Weak transcription Primary B cells from peripheral blood blood
20 chr22:32314600-32320400 Enhancers Primary neutrophils fromperipheralblood blood
21 chr22:32315000-32319200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr22:32315000-32324800 Weak transcription Brain Cingulate Gyrus brain
23 chr22:32315200-32316600 Weak transcription Brain Hippocampus Middle brain
24 chr22:32315200-32318600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr22:32315200-32318800 Weak transcription Placenta Placenta
26 chr22:32315200-32319200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr22:32315200-32319800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr22:32315200-32321200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr22:32315200-32322200 Weak transcription Brain Angular Gyrus brain
30 chr22:32315400-32317200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr22:32315400-32317400 Weak transcription Primary B cells from cord blood blood
32 chr22:32315400-32318400 Enhancers Monocytes-CD14+_RO01746 blood
33 chr22:32315400-32318600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr22:32315400-32318600 Weak transcription Spleen Spleen
35 chr22:32315400-32319800 Weak transcription Fetal Muscle Leg muscle
36 chr22:32316000-32316800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr22:32316200-32317600 Enhancers HepG2 liver
38 chr22:32316200-32318600 Weak transcription Brain Anterior Caudate brain
39 chr22:32316400-32318600 Weak transcription K562 blood

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Last update: Aug 31, 2015