Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10510964	0.82[ASN][1000 genomes]
rs12493000	0.82[ASN][1000 genomes]
rs1490254	0.88[ASN][1000 genomes]
rs1490271	0.90[CEU][hapmap]
rs17046182	0.82[ASN][1000 genomes]
rs17805868	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1994610	0.82[ASN][1000 genomes]
rs2017422	0.88[ASN][1000 genomes]
rs4856846	0.82[ASN][1000 genomes]
rs4856847	0.82[ASN][1000 genomes]
rs57179316	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66509153	0.82[ASN][1000 genomes]
rs66649021	0.81[ASN][1000 genomes]
rs66731212	0.89[ASN][1000 genomes]
rs66955393	0.88[ASN][1000 genomes]
rs67857762	0.82[ASN][1000 genomes]
rs72914503	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72914506	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7612558	0.82[ASN][1000 genomes]
rs880985	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs885110	0.82[ASN][1000 genomes]
rs902323	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs931437	0.82[ASN][1000 genomes]
rs985344	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007093	chr3:67113534-67602973	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:67335200-67341000	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr3:67337400-67339800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr3:67338800-67340600	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr3:67338800-67344000	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr3:67339200-67340200	Enhancers	Fetal Brain Male	brain
6	chr3:67339200-67340200	Weak transcription	Skeletal Muscle Female	skeletal muscle

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