Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10510964	0.82[ASN][1000 genomes]
rs12490292	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12493000	0.82[ASN][1000 genomes]
rs1490254	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs17046182	0.81[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs17805868	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1994610	0.82[ASN][1000 genomes]
rs2017422	0.88[ASN][1000 genomes]
rs4856846	0.82[ASN][1000 genomes]
rs4856847	0.82[ASN][1000 genomes]
rs61692736	0.82[AFR][1000 genomes]
rs66509153	0.85[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs66649021	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs66731212	0.89[ASN][1000 genomes]
rs66955393	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs67857762	0.82[ASN][1000 genomes]
rs72914503	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72914506	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7612558	0.82[ASN][1000 genomes]
rs880985	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs885110	0.83[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs902323	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs931437	0.80[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs985344	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007093	chr3:67113534-67602973	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:67338800-67344000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr3:67339800-67342600	Enhancers	HSMMtube	muscle
3	chr3:67340200-67341200	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr3:67340200-67342600	Weak transcription	Brain Hippocampus Middle	brain
5	chr3:67340400-67341600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr3:67340400-67342800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr3:67340600-67341600	Enhancers	Primary B cells from peripheral blood	blood
8	chr3:67340600-67341600	Enhancers	Placenta	Placenta
9	chr3:67340800-67341200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
10	chr3:67340800-67342200	Weak transcription	Stomach Mucosa	stomach
11	chr3:67340800-67347200	Enhancers	HepG2	liver
12	chr3:67341000-67341400	Weak transcription	Brain Cingulate Gyrus	brain
13	chr3:67341000-67342400	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr3:67341000-67342600	Weak transcription	Aorta	Aorta

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