Variant report

Variant rs12490307
Chromosome Location chr3:195623440-195623441
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195617600-195624400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
2 chr3:195620800-195624600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr3:195621200-195623600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
4 chr3:195621200-195623600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
5 chr3:195621200-195624600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr3:195621400-195623600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
7 chr3:195621400-195623800 Flanking Active TSS Fetal Muscle Leg muscle
8 chr3:195621400-195624200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr3:195621400-195624400 Flanking Active TSS Stomach Smooth Muscle stomach
10 chr3:195621600-195623600 Flanking Active TSS Fetal Muscle Trunk muscle
11 chr3:195621600-195623800 Flanking Active TSS Primary hematopoietic stem cells blood
12 chr3:195621600-195623800 Active TSS Pancreatic Islets Pancreatic Islet
13 chr3:195621800-195623600 Flanking Active TSS Colonic Mucosa Colon
14 chr3:195621800-195623800 Active TSS Aorta Aorta
15 chr3:195622400-195625200 Enhancers Stomach Mucosa stomach
16 chr3:195622600-195625000 Enhancers Spleen Spleen
17 chr3:195622800-195623800 Flanking Active TSS NH-A brain
18 chr3:195623000-195623600 Flanking Active TSS Primary monocytes fromperipheralblood blood
19 chr3:195623000-195623600 Flanking Active TSS Primary T cells fromperipheralblood blood
20 chr3:195623000-195623600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
21 chr3:195623000-195623600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
22 chr3:195623000-195623600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
23 chr3:195623000-195623600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
24 chr3:195623000-195623600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
25 chr3:195623000-195623600 Flanking Active TSS Brain Substantia Nigra brain
26 chr3:195623000-195623600 Flanking Active TSS Fetal Intestine Large intestine
27 chr3:195623000-195623600 Flanking Active TSS Placenta Placenta
28 chr3:195623000-195623600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
29 chr3:195623000-195623600 Flanking Active TSS Rectal Smooth Muscle rectum
30 chr3:195623000-195623800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr3:195623000-195623800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
32 chr3:195623000-195623800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
33 chr3:195623000-195623800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
34 chr3:195623000-195623800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:195623000-195623800 Flanking Active TSS Primary B cells from cord blood blood
36 chr3:195623000-195623800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
37 chr3:195623000-195623800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
38 chr3:195623000-195623800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
39 chr3:195623000-195623800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
40 chr3:195623000-195623800 Flanking Active TSS Adipose Nuclei Adipose
41 chr3:195623000-195623800 Flanking Active TSS Brain Germinal Matrix brain
42 chr3:195623000-195623800 Flanking Active TSS Duodenum Mucosa Duodenum
43 chr3:195623000-195623800 Flanking Active TSS Fetal Brain Male brain
44 chr3:195623000-195623800 Flanking Active TSS Fetal Brain Female brain
45 chr3:195623000-195623800 Flanking Active TSS Fetal Heart heart
46 chr3:195623000-195623800 Flanking Active TSS Fetal Lung lung
47 chr3:195623000-195623800 Flanking Active TSS Psoas Muscle Psoas
48 chr3:195623000-195623800 Enhancers Sigmoid Colon Sigmoid Colon
49 chr3:195623000-195623800 Flanking Active TSS GM12878-XiMat blood
50 chr3:195623000-195623800 Flanking Active TSS HMEC breast

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