Variant report

Variant rs13084520
Chromosome Location chr3:195637439-195637440
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195636800-195637600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:195636800-195637600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
3 chr3:195636800-195637600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
4 chr3:195636800-195637600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
5 chr3:195636800-195637600 Flanking Active TSS HMEC breast
6 chr3:195636800-195637600 Flanking Active TSS K562 blood
7 chr3:195636800-195637800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr3:195636800-195638400 Weak transcription Placenta Amnion Placenta Amnion
9 chr3:195637000-195637600 Flanking Active TSS H1 Cell Line embryonic stem cell
10 chr3:195637000-195637600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
11 chr3:195637000-195637600 Enhancers Fetal Thymus thymus
12 chr3:195637000-195637600 Enhancers Spleen Spleen
13 chr3:195637000-195637600 Flanking Bivalent TSS/Enh HepG2 liver
14 chr3:195637000-195641600 Weak transcription Pancreas Pancrea
15 chr3:195637000-195641600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr3:195637000-195641600 Weak transcription NHDF-Ad bronchial
17 chr3:195637200-195637600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr3:195637200-195637600 Flanking Active TSS H9 Cell Line embryonic stem cell
19 chr3:195637200-195637600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
20 chr3:195637200-195637600 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
21 chr3:195637200-195637600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr3:195637200-195637600 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
23 chr3:195637200-195637600 Enhancers Primary T cells fromperipheralblood blood
24 chr3:195637200-195637600 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr3:195637200-195637600 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr3:195637200-195637600 Enhancers Cortex derived primary cultured neurospheres brain
27 chr3:195637200-195637600 Enhancers Colon Smooth Muscle Colon
28 chr3:195637200-195637600 Enhancers Fetal Muscle Trunk muscle
29 chr3:195637200-195637800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr3:195637200-195637800 Genic enhancers Fetal Intestine Small intestine
31 chr3:195637200-195637800 Enhancers Lung lung
32 chr3:195637200-195638000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
33 chr3:195637200-195638000 Enhancers Muscle Satellite Cultured Cells --
34 chr3:195637200-195638400 Enhancers Rectal Mucosa Donor 31 rectum
35 chr3:195637200-195638400 Weak transcription NHLF lung
36 chr3:195637200-195638600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr3:195637200-195638600 Enhancers Liver Liver
38 chr3:195637200-195639000 Weak transcription Brain Germinal Matrix brain
39 chr3:195637200-195639200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr3:195637200-195641400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr3:195637200-195641400 Weak transcription HSMMtube muscle
42 chr3:195637200-195641600 Weak transcription Primary hematopoietic stem cells blood
43 chr3:195637200-195641600 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr3:195637200-195641600 Weak transcription Brain Substantia Nigra brain
45 chr3:195637200-195641600 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr3:195637200-195641600 Weak transcription Fetal Heart heart
47 chr3:195637200-195641600 Weak transcription HSMM muscle
48 chr3:195637200-195641600 Weak transcription HUVEC blood vessel
49 chr3:195637200-195641600 Weak transcription NH-A brain
50 chr3:195637200-195641800 Weak transcription Primary T cells from cord blood blood

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