Variant report

Variant rs62283334
Chromosome Location chr3:195624484-195624485
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195620800-195624600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:195621200-195624600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr3:195622400-195625200 Enhancers Stomach Mucosa stomach
4 chr3:195622600-195625000 Enhancers Spleen Spleen
5 chr3:195623000-195624600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
6 chr3:195623000-195624600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr3:195623200-195625600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
8 chr3:195623200-195633000 Weak transcription Small Intestine intestine
9 chr3:195623400-195625000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr3:195623400-195625000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:195623400-195625000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr3:195623400-195625000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
13 chr3:195623400-195625200 Enhancers Duodenum Smooth Muscle Duodenum
14 chr3:195623400-195625200 Enhancers Fetal Stomach stomach
15 chr3:195623400-195625400 Enhancers ES-WA7 Cell Line embryonic stem cell
16 chr3:195623400-195625400 Enhancers H1 Cell Line embryonic stem cell
17 chr3:195623400-195625400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr3:195623400-195625400 Enhancers HUES48 Cell Line embryonic stem cell
19 chr3:195623400-195625400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr3:195623400-195625400 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr3:195623400-195625400 Enhancers Esophagus oesophagus
22 chr3:195623400-195625400 Enhancers Lung lung
23 chr3:195623400-195625600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr3:195623400-195625600 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr3:195623400-195625600 Enhancers Left Ventricle heart
26 chr3:195623400-195625600 Enhancers Placenta Amnion Placenta Amnion
27 chr3:195623400-195625600 Enhancers Thymus Thymus
28 chr3:195623400-195627000 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr3:195623400-195627800 Enhancers Fetal Thymus thymus
30 chr3:195623400-195632400 Enhancers Primary B cells from peripheral blood blood
31 chr3:195623600-195624600 Enhancers Primary T cells from cord blood blood
32 chr3:195623600-195625000 Enhancers Rectal Mucosa Donor 29 rectum
33 chr3:195623600-195625200 Enhancers Primary mononuclear cells fromperipheralblood Blood
34 chr3:195623600-195625400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr3:195623600-195625400 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr3:195623600-195625400 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr3:195623600-195625400 Enhancers Cortex derived primary cultured neurospheres brain
38 chr3:195623600-195625400 Enhancers Fetal Muscle Trunk muscle
39 chr3:195623600-195625600 Enhancers Primary T regulatory cells fromperipheralblood blood
40 chr3:195623600-195625800 Enhancers Primary T cells fromperipheralblood blood
41 chr3:195623600-195625800 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr3:195623600-195626000 Enhancers Placenta Placenta
43 chr3:195623600-195627200 Enhancers Primary monocytes fromperipheralblood blood
44 chr3:195623600-195629400 Enhancers Primary T helper cells fromperipheralblood blood
45 chr3:195623600-195631000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr3:195623800-195624600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:195623800-195624600 Enhancers Adipose Nuclei Adipose
48 chr3:195623800-195624800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr3:195623800-195625000 Weak transcription H9 Cell Line embryonic stem cell
50 chr3:195623800-195625000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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