Variant report

Variant rs62283338
Chromosome Location chr3:195634304-195634305
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195624000-195634400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:195625200-195634400 Weak transcription Colon Smooth Muscle Colon
3 chr3:195625400-195634600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr3:195628800-195634800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr3:195629600-195634600 Weak transcription HUVEC blood vessel
6 chr3:195632000-195635000 Enhancers Sigmoid Colon Sigmoid Colon
7 chr3:195632400-195635400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr3:195632600-195637200 Active TSS Pancreatic Islets Pancreatic Islet
9 chr3:195632800-195634600 Enhancers K562 blood
10 chr3:195632800-195635000 Flanking Active TSS HMEC breast
11 chr3:195632800-195635400 Flanking Active TSS NHEK skin
12 chr3:195632800-195635600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
13 chr3:195632800-195635600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr3:195632800-195635600 Flanking Active TSS Duodenum Mucosa Duodenum
15 chr3:195632800-195635800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
16 chr3:195632800-195635800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr3:195633000-195634800 Enhancers NH-A brain
18 chr3:195633000-195635000 Enhancers Gastric stomach
19 chr3:195633000-195635200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr3:195633000-195635400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr3:195633000-195635400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
22 chr3:195633000-195635600 Flanking Active TSS Liver Liver
23 chr3:195633000-195636000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr3:195633000-195636000 Flanking Active TSS Dnd41 blood
25 chr3:195633200-195634800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr3:195633200-195635000 Flanking Active TSS Fetal Muscle Leg muscle
27 chr3:195633200-195635400 Flanking Active TSS Primary monocytes fromperipheralblood blood
28 chr3:195633200-195635400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
29 chr3:195633200-195635400 Flanking Active TSS Primary B cells from peripheral blood blood
30 chr3:195633200-195635400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
31 chr3:195633200-195635400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
32 chr3:195633200-195635400 Flanking Active TSS Fetal Thymus thymus
33 chr3:195633200-195635400 Flanking Active TSS NHDF-Ad bronchial
34 chr3:195633200-195635600 Flanking Active TSS Primary T cells fromperipheralblood blood
35 chr3:195633200-195635600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
36 chr3:195633200-195635600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
37 chr3:195633200-195635600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr3:195633200-195635600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
39 chr3:195633200-195635600 Flanking Active TSS Osteobl bone
40 chr3:195633200-195635800 Flanking Active TSS Primary B cells from cord blood blood
41 chr3:195633200-195635800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
42 chr3:195633200-195636200 Flanking Active TSS Primary hematopoietic stem cells blood
43 chr3:195633400-195634800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr3:195633400-195634800 Enhancers Fetal Lung lung
45 chr3:195633400-195634800 Active TSS Rectal Smooth Muscle rectum
46 chr3:195633400-195635600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
47 chr3:195633400-195635600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
48 chr3:195633400-195635600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
49 chr3:195633400-195635800 Enhancers Fetal Brain Male brain
50 chr3:195633400-195635800 Enhancers Fetal Heart heart

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