Variant report

Variant	rs12500723
Chromosome Location	chr4:74323312-74323313
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10001225	0.85[ASN][1000 genomes]
rs3822100	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4446279	0.82[EUR][1000 genomes]
rs4640638	0.82[EUR][1000 genomes]
rs6834059	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3430875	chr4:74243646-74420354	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:74319600-74324400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:74322400-74323600	Weak transcription	HepG2	liver
3	chr4:74322800-74324400	Weak transcription	Fetal Intestine Small	intestine
4	chr4:74322800-74328000	Weak transcription	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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