Variant report

Variant	rs12518184
Chromosome Location	chr5:128196957-128196958
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 72 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:69)

rs_ID	r²[population]
rs12189398	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13166325	0.83[ASN][1000 genomes]
rs13169590	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13179872	0.84[AMR][1000 genomes]
rs13190393	0.83[ASN][1000 genomes]
rs1421890	0.89[ASN][1000 genomes]
rs17616784	0.83[ASN][1000 genomes]
rs1898543	0.83[ASN][1000 genomes]
rs1898544	0.83[ASN][1000 genomes]
rs1898549	0.83[ASN][1000 genomes]
rs2526196	0.83[ASN][1000 genomes]
rs2526201	0.83[ASN][1000 genomes]
rs2526202	0.83[ASN][1000 genomes]
rs2526209	0.83[ASN][1000 genomes]
rs2526210	0.83[ASN][1000 genomes]
rs2526211	0.83[ASN][1000 genomes]
rs2526212	0.83[ASN][1000 genomes]
rs2526213	0.83[ASN][1000 genomes]
rs2526214	0.83[ASN][1000 genomes]
rs2526225	0.80[ASN][1000 genomes]
rs2526239	0.80[ASN][1000 genomes]
rs2526240	0.83[ASN][1000 genomes]
rs2526241	0.83[ASN][1000 genomes]
rs2526243	0.83[ASN][1000 genomes]
rs2577399	0.83[ASN][1000 genomes]
rs2577402	0.83[ASN][1000 genomes]
rs2577403	0.83[ASN][1000 genomes]
rs2577445	0.83[ASN][1000 genomes]
rs2577446	0.83[ASN][1000 genomes]
rs2577504	0.83[ASN][1000 genomes]
rs2577506	0.83[ASN][1000 genomes]
rs2577507	0.83[ASN][1000 genomes]
rs2577508	0.83[ASN][1000 genomes]
rs2577509	0.83[ASN][1000 genomes]
rs2577510	0.83[ASN][1000 genomes]
rs2577511	0.83[ASN][1000 genomes]
rs2577512	0.83[ASN][1000 genomes]
rs2577513	0.83[ASN][1000 genomes]
rs2577514	0.83[ASN][1000 genomes]
rs2577528	0.83[ASN][1000 genomes]
rs2577529	0.80[ASN][1000 genomes]
rs2577530	0.83[ASN][1000 genomes]
rs2577533	0.83[ASN][1000 genomes]
rs2577534	0.83[ASN][1000 genomes]
rs2577535	0.83[ASN][1000 genomes]
rs2577536	0.81[ASN][1000 genomes]
rs2577537	0.81[ASN][1000 genomes]
rs2577538	0.81[ASN][1000 genomes]
rs2577555	0.83[ASN][1000 genomes]
rs2577556	0.83[ASN][1000 genomes]
rs2577560	0.83[ASN][1000 genomes]
rs2577561	0.83[ASN][1000 genomes]
rs2577562	0.83[ASN][1000 genomes]
rs34075274	0.83[ASN][1000 genomes]
rs34299037	0.83[ASN][1000 genomes]
rs34683252	0.83[ASN][1000 genomes]
rs34813132	0.83[ASN][1000 genomes]
rs34831887	0.83[ASN][1000 genomes]
rs35044703	0.83[ASN][1000 genomes]
rs35388070	0.83[ASN][1000 genomes]
rs35696888	0.83[ASN][1000 genomes]
rs35767068	0.83[ASN][1000 genomes]
rs62391237	0.81[ASN][1000 genomes]
rs62391271	0.83[ASN][1000 genomes]
rs62391272	0.83[ASN][1000 genomes]
rs62391297	0.80[ASN][1000 genomes]
rs71587998	0.86[ASN][1000 genomes]
rs71592877	0.80[ASN][1000 genomes]
rs7349831	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv599699	chr5:128172808-128259451	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv462443	chr5:128172808-128298437	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv599700	chr5:128172808-128298437	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:128193400-128199800	Weak transcription	Fetal Stomach	stomach
2	chr5:128194200-128205600	Weak transcription	Fetal Heart	heart

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