The 2.0 version of rSNPBase

Variant report

Variant rs12532489
Chromosome Location chr7:150923240-150923241
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:150922200-150923400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr7:150922200-150923400 Weak transcription Aorta Aorta
3 chr7:150922400-150923400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
4 chr7:150922400-150923400 Weak transcription Placenta Amnion Placenta Amnion
5 chr7:150922600-150923400 Enhancers Primary monocytes fromperipheralblood blood
6 chr7:150922600-150923400 Enhancers Primary T helper cells fromperipheralblood blood
7 chr7:150922600-150923400 Enhancers Primary mononuclear cells fromperipheralblood Blood
8 chr7:150922600-150923600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
9 chr7:150922600-150923600 Enhancers Spleen Spleen
10 chr7:150922600-150924000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
11 chr7:150922800-150923400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
12 chr7:150922800-150923400 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr7:150922800-150923600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
14 chr7:150922800-150923600 Enhancers Small Intestine intestine
15 chr7:150922800-150923600 Flanking Active TSS GM12878-XiMat blood
16 chr7:150922800-150923600 Flanking Active TSS HMEC breast
17 chr7:150922800-150923800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
18 chr7:150922800-150923800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr7:150922800-150923800 Flanking Active TSS Fetal Brain Female brain
20 chr7:150922800-150923800 Flanking Active TSS Psoas Muscle Psoas
21 chr7:150922800-150923800 Flanking Active TSS Stomach Smooth Muscle stomach
22 chr7:150922800-150924000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr7:150923000-150923400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr7:150923000-150923400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr7:150923000-150923400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr7:150923000-150923400 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr7:150923000-150923400 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr7:150923000-150923400 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
29 chr7:150923000-150923400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
30 chr7:150923000-150923400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
31 chr7:150923000-150923400 Enhancers Primary B cells from peripheral blood blood
32 chr7:150923000-150923400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
33 chr7:150923000-150923400 Enhancers Esophagus oesophagus
34 chr7:150923000-150923400 Enhancers Placenta Placenta
35 chr7:150923000-150923400 Enhancers Gastric stomach
36 chr7:150923000-150923400 Enhancers Sigmoid Colon Sigmoid Colon
37 chr7:150923000-150923400 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
38 chr7:150923000-150923400 Enhancers Thymus Thymus
39 chr7:150923000-150923400 Flanking Active TSS A549 lung
40 chr7:150923000-150923400 Transcr. at gene 5' and 3' Dnd41 blood
41 chr7:150923000-150923400 Transcr. at gene 5' and 3' K562 blood
42 chr7:150923000-150923600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
43 chr7:150923000-150923600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr7:150923000-150923600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
45 chr7:150923000-150923600 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
46 chr7:150923000-150923600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
47 chr7:150923000-150923600 Flanking Active TSS Fetal Brain Male brain
48 chr7:150923000-150923600 Flanking Active TSS Left Ventricle heart
49 chr7:150923000-150923600 Flanking Active TSS Right Atrium heart
50 chr7:150923000-150923600 Flanking Active TSS Right Ventricle heart

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Last update: Aug 31, 2015