Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10504371	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12544687	0.84[EUR][1000 genomes]
rs12549559	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13248395	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13255222	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13256546	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13273490	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13280176	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1838420	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1838421	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1838424	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2018264	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2083995	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2356371	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2883915	0.83[EUR][1000 genomes]
rs35152868	0.93[ASN][1000 genomes]
rs35496690	0.88[AMR][1000 genomes]
rs3910845	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4027777	0.86[AMR][1000 genomes]
rs6981673	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6991156	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7014553	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7017705	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs874777	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948343	chr8:64804219-65328394	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv890969	chr8:64807144-65047353	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64969800-64973200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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