Variant report

Variant	rs12568404
Chromosome Location	chr1:69587084-69587085
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10082005	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10082155	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10082192	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10082242	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11810068	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12561979	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12564688	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12567267	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1336157	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1613058	0.90[ASN][1000 genomes]
rs17097425	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17130848	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17130867	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17130869	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17130870	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17483465	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72682283	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72682285	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72682291	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72682298	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:69586200-69588400	Enhancers	Adipose Nuclei	Adipose
2	chr1:69586200-69588600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr1:69586400-69587200	Weak transcription	HMEC	breast
4	chr1:69586400-69592400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr1:69586400-69596800	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr1:69586600-69587400	Weak transcription	Brain Angular Gyrus	brain
7	chr1:69586600-69588000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr1:69586600-69588600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr1:69586600-69588600	Weak transcription	Brain Hippocampus Middle	brain
10	chr1:69586800-69587200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr1:69586800-69592400	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr1:69587000-69588000	Weak transcription	Aorta	Aorta
13	chr1:69587000-69592000	Weak transcription	Fetal Brain Male	brain

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