Variant report

Variant	rs12588478
Chromosome Location	chr14:67837891-67837892
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:67836281..67838188-chr14:67843116..67845850,2	MCF-7	breast:
2	chr14:67836330..67839747-chr14:67839850..67842093,3	MCF-7	breast:
3	chr14:67826492..67828936-chr14:67836980..67838913,2	K562	blood:
4	chr14:67831655..67833160-chr14:67836310..67837942,2	K562	blood:
5	chr14:67833401..67836470-chr14:67837034..67842117,5	K562	blood:
6	chr14:67837736..67843845-chr14:67848220..67852492,7	MCF-7	breast:
7	chr14:67830118..67835018-chr14:67835890..67840429,6	MCF-7	breast:
8	chr14:67830026..67833675-chr14:67835617..67839750,4	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000100554	Chromatin interaction
ENSG00000134001	Chromatin interaction

Extended variants
information (count: 246 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:239)

rs_ID	r²[population]
rs10129779	0.85[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10130796	0.82[ASN][1000 genomes]
rs10131175	0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10131212	0.91[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10135163	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10135498	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10135727	0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10135883	0.82[ASN][1000 genomes]
rs10135903	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10136710	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10137026	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10137557	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10138755	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10138824	0.91[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10138932	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10139015	0.87[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10139585	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10139684	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10139953	0.80[AMR][1000 genomes]
rs10140817	0.91[CHB][hapmap];1.00[JPT][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10141180	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs10141879	0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs10143251	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10143916	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10144090	0.85[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10144218	0.85[ASN][1000 genomes]
rs10144401	0.91[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10144417	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10145586	0.86[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs10145744	0.84[ASN][1000 genomes]
rs10146663	0.91[CHB][hapmap];1.00[JPT][hapmap];0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10146722	0.94[CHB][hapmap];1.00[JPT][hapmap];0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10147640	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs10147852	0.85[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs10150902	0.91[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10151464	0.91[CHB][hapmap];1.00[JPT][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10152002	0.84[ASN][1000 genomes]
rs10431718	0.80[CHB][hapmap];1.00[JPT][hapmap]
rs1044750	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1045060	0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10459453	0.86[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs10459529	0.84[ASN][1000 genomes]
rs10459530	0.83[ASN][1000 genomes]
rs10459531	0.84[ASN][1000 genomes]
rs1073604	0.83[ASN][1000 genomes]
rs1073606	0.84[ASN][1000 genomes]
rs1073607	0.85[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs1078194	0.86[CHB][hapmap];0.87[JPT][hapmap]
rs10873200	0.81[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1113973	0.82[ASN][1000 genomes]
rs11158655	0.80[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs11158658	0.86[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs12323494	0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12323911	0.85[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12586402	0.82[ASN][1000 genomes]
rs12586552	0.89[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12586609	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12587679	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs12588292	0.82[JPT][hapmap]
rs12588355	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12588388	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12589091	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12589218	0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12589325	0.87[ASN][1000 genomes]
rs12589606	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12589671	0.95[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12589983	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12590065	0.83[CHB][hapmap]
rs12590952	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12590956	0.81[CHB][hapmap];0.87[JPT][hapmap]
rs1318914	0.86[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs13379142	0.95[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13379368	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1473733	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs1475127	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs1475128	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1475129	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1535489	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1535490	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1535491	0.85[CHB][hapmap];1.00[JPT][hapmap];0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1536271	0.95[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1536272	0.91[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1536273	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1555853	0.85[CHB][hapmap];0.81[JPT][hapmap];0.88[ASN][1000 genomes]
rs17093616	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs17104103	0.80[CHB][hapmap];1.00[JPT][hapmap]
rs17104106	0.81[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs17104109	0.81[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs17104114	0.80[CHB][hapmap];0.91[JPT][hapmap]
rs17104188	0.85[ASN][1000 genomes]
rs17104223	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs17104224	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs17248421	0.90[JPT][hapmap]
rs17248526	0.85[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs17248567	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs17248616	0.95[CHB][hapmap];1.00[JPT][hapmap];0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17248714	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17564263	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17836683	0.84[ASN][1000 genomes]
rs17836702	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1885589	0.91[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1885590	0.82[JPT][hapmap]
rs1918484	0.82[ASN][1000 genomes]
rs1980817	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2025208	0.82[ASN][1000 genomes]
rs2025209	0.80[ASN][1000 genomes]
rs2031563	0.90[CHB][hapmap];0.95[JPT][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2057396	0.91[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2094162	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs2146229	0.91[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2146230	0.85[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2236333	0.91[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2274335	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2274336	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2274338	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2296560	0.95[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2296562	0.83[AMR][1000 genomes]
rs2296563	0.84[AMR][1000 genomes]
rs28370351	0.80[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs28401319	0.85[ASN][1000 genomes]
rs28405138	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs28411190	0.84[ASN][1000 genomes]
rs28422832	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28424592	0.85[ASN][1000 genomes]
rs28441403	0.92[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs28456209	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28458235	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs28472807	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs28522593	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs28522922	0.85[ASN][1000 genomes]
rs28524846	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs28558916	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28562402	0.84[ASN][1000 genomes]
rs28584286	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs28607485	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs28617290	0.85[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs28668536	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28696352	0.81[ASN][1000 genomes]
rs28706091	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs28866617	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs3759755	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3784081	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3784085	0.82[CHB][hapmap]
rs3809387	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs3818467	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3818468	0.91[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs3825722	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4058254	0.91[CHB][hapmap];0.95[JPT][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4058266	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs45612334	0.84[ASN][1000 genomes]
rs56918786	0.81[AMR][1000 genomes]
rs57025434	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs57234033	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs57266997	0.84[ASN][1000 genomes]
rs57782535	0.85[ASN][1000 genomes]
rs58287888	0.81[AMR][1000 genomes]
rs58809332	0.85[ASN][1000 genomes]
rs58954149	0.85[ASN][1000 genomes]
rs60953279	0.85[ASN][1000 genomes]
rs61024303	0.83[ASN][1000 genomes]
rs61281789	0.84[ASN][1000 genomes]
rs61510566	0.83[ASN][1000 genomes]
rs61749574	0.84[ASN][1000 genomes]
rs6573755	0.90[JPT][hapmap]
rs6573760	0.91[JPT][hapmap]
rs6573763	0.83[CHB][hapmap];0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs6573764	0.85[ASN][1000 genomes]
rs6573769	0.82[CHB][hapmap];0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs67968914	0.80[ASN][1000 genomes]
rs7140287	0.85[ASN][1000 genomes]
rs7144928	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7149535	0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7151684	0.84[ASN][1000 genomes]
rs7152903	0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs7153350	0.92[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7153725	0.80[AMR][1000 genomes]
rs7153965	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7156441	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7157211	0.82[ASN][1000 genomes]
rs7158743	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7158751	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7160238	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs72476727	0.90[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs73279028	0.84[ASN][1000 genomes]
rs73280932	0.83[ASN][1000 genomes]
rs73280967	0.85[ASN][1000 genomes]
rs73282706	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs73282711	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73282717	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73282734	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs73282746	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73282766	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73282772	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73282775	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73282776	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73282798	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73284805	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73284810	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73284812	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8004148	0.90[JPT][hapmap]
rs8004332	0.91[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs8004488	0.91[JPT][hapmap]
rs8004864	0.86[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs8005756	0.80[AMR][1000 genomes]
rs8005876	0.80[AMR][1000 genomes]
rs8005900	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs8006042	0.80[JPT][hapmap];0.80[ASN][1000 genomes]
rs8006391	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8006519	0.95[CHB][hapmap];0.86[JPT][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8007033	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8007618	0.85[CHB][hapmap];0.81[JPT][hapmap];0.89[ASN][1000 genomes]
rs8007866	0.91[CHB][hapmap];0.83[JPT][hapmap]
rs8008155	0.86[ASN][1000 genomes]
rs8008236	0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs8008619	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8008724	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8009318	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs8014104	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs8014259	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs8014871	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8014966	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8015302	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs8015641	0.86[CHB][hapmap]
rs8015862	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs8016024	0.82[CHB][hapmap];0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs8016037	0.85[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs8016623	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8017301	0.85[ASN][1000 genomes]
rs8018623	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs8018738	0.84[ASN][1000 genomes]
rs8019398	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs8020720	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs8020850	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs8021227	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs8021621	0.92[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8021896	0.91[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9323496	0.84[ASN][1000 genomes]
rs9743911	0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9743983	0.81[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751285	chr14:67364747-67886781	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv1045518	chr14:67529049-67959582	Strong transcription Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv456331	chr14:67732861-68103780	Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
4	nsv564961	chr14:67732861-68103780	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
5	nsv470651	chr14:67732861-68113293	Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
6	nsv1054389	chr14:67804987-67922598	Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
7	nsv542121	chr14:67804987-67922598	Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs12588478	ATP6V1D	cis	Thyroid	GTEx
rs12588478	EIF2S1	cis	multi-tissue	Pritchard

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67828200-67841600	Weak transcription	Aorta	Aorta
2	chr14:67828400-67854000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr14:67828600-67838000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr14:67828600-67854600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:67828800-67854000	Strong transcription	HUES64 Cell Line	embryonic stem cell
6	chr14:67829000-67855200	Strong transcription	Fetal Thymus	thymus
7	chr14:67829200-67852000	Strong transcription	Placenta	Placenta
8	chr14:67829200-67853200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr14:67829200-67853600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
10	chr14:67829400-67838200	Weak transcription	Stomach Mucosa	stomach
11	chr14:67829400-67841200	Genic enhancers	Primary T helper cells PMA-I stimulated	--
12	chr14:67829400-67853600	Strong transcription	Primary B cells from peripheral blood	blood
13	chr14:67829400-67854000	Strong transcription	HUES48 Cell Line	embryonic stem cell
14	chr14:67829400-67854200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr14:67829400-67854200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
16	chr14:67829600-67854800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr14:67829800-67838600	Strong transcription	Brain Hippocampus Middle	brain
18	chr14:67829800-67839400	Strong transcription	Rectal Mucosa Donor 31	rectum
19	chr14:67829800-67843200	Weak transcription	Fetal Heart	heart
20	chr14:67829800-67854000	Strong transcription	HUES6 Cell Line	embryonic stem cell
21	chr14:67829800-67854400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
22	chr14:67830000-67854000	Strong transcription	HSMM	muscle
23	chr14:67830200-67851800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr14:67830400-67838200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr14:67830400-67854000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr14:67830400-67855000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr14:67830400-67855000	Strong transcription	Liver	Liver
28	chr14:67830600-67838400	Strong transcription	Primary hematopoietic stem cells	blood
29	chr14:67830800-67853000	Strong transcription	Cortex derived primary cultured neurospheres	brain
30	chr14:67831000-67854000	Strong transcription	Primary monocytes fromperipheralblood	blood
31	chr14:67831000-67855200	Strong transcription	Monocytes-CD14+_RO01746	blood
32	chr14:67831200-67854600	Strong transcription	Primary T cells from cord blood	blood
33	chr14:67831200-67864600	Strong transcription	Duodenum Mucosa	Duodenum
34	chr14:67831400-67845400	Strong transcription	H1 Cell Line	embryonic stem cell
35	chr14:67831400-67853000	Strong transcription	Adipose Nuclei	Adipose
36	chr14:67831400-67854200	Strong transcription	Duodenum Smooth Muscle	Duodenum
37	chr14:67831400-67854400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr14:67831400-67856200	Strong transcription	Rectal Mucosa Donor 29	rectum
39	chr14:67831600-67838200	Strong transcription	Fetal Intestine Large	intestine
40	chr14:67831600-67846000	Strong transcription	Skeletal Muscle Female	skeletal muscle
41	chr14:67831600-67847000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr14:67831600-67852400	Strong transcription	Primary neutrophils fromperipheralblood	blood
43	chr14:67831600-67853200	Strong transcription	Muscle Satellite Cultured Cells	--
44	chr14:67831800-67838800	Strong transcription	HepG2	liver
45	chr14:67831800-67843800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr14:67831800-67854600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr14:67832000-67838200	Strong transcription	Brain Germinal Matrix	brain
48	chr14:67832000-67838800	Strong transcription	Stomach Smooth Muscle	stomach
49	chr14:67832600-67842200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
50	chr14:67833400-67843600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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