Variant report

Variant	rs6573769
Chromosome Location	chr14:67831459-67831460
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr14:67831201-67831689	MCF10A-Er-Src	breast:	n/a	n/a
2	CTCF	chr14:67831380-67831530	Caco-2	colon:	n/a	n/a

Variant related genes	Relation type
ATP6V1D	TF binding region
EIF2S1	TF binding region

Extended variants
information (count: 164 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:157)

rs_ID	r²[population]
rs1006595	0.88[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap]
rs10129185	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10129779	0.82[JPT][hapmap];0.89[YRI][hapmap]
rs10131175	0.87[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes]
rs10131212	0.82[CHB][hapmap];0.80[CHD][hapmap];0.90[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap]
rs10132093	0.95[CHB][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs10135163	0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs10135498	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs10135903	0.86[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap]
rs10136710	0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs10137557	0.90[CHB][hapmap];0.81[JPT][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs10138755	0.90[CHB][hapmap];0.80[JPT][hapmap];0.84[AMR][1000 genomes]
rs10138824	0.82[CHB][hapmap];0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap]
rs10139585	0.81[AMR][1000 genomes]
rs10139684	0.81[AMR][1000 genomes]
rs10139953	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10140817	0.82[CHB][hapmap];0.83[JPT][hapmap];0.89[YRI][hapmap]
rs10141180	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10141879	0.80[CHD][hapmap];0.92[GIH][hapmap]
rs10143251	0.81[AMR][1000 genomes]
rs10144090	0.80[CHD][hapmap];0.92[GIH][hapmap];0.82[JPT][hapmap];0.83[MEX][hapmap];0.83[YRI][hapmap]
rs10144122	0.91[ASN][1000 genomes]
rs10144401	0.82[CHB][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.89[YRI][hapmap]
rs10144417	0.87[CHB][hapmap];0.82[CHD][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs10144774	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10145586	0.82[JPT][hapmap];0.83[YRI][hapmap]
rs10146389	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10146663	0.82[CHB][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap]
rs10146722	0.81[JPT][hapmap];0.81[YRI][hapmap]
rs10147362	0.81[ASN][1000 genomes]
rs10147852	0.80[CHD][hapmap];0.90[GIH][hapmap];0.83[JPT][hapmap];0.80[YRI][hapmap]
rs10149615	0.93[ASN][1000 genomes]
rs10150902	0.82[CHB][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap]
rs10151464	0.82[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap]
rs10431718	0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap]
rs1044745	0.89[ASN][1000 genomes]
rs1045060	0.87[CHB][hapmap];0.82[CHD][hapmap];0.92[GIH][hapmap];0.82[JPT][hapmap];0.83[MEX][hapmap];0.82[MKK][hapmap];0.90[YRI][hapmap];0.81[AMR][1000 genomes]
rs10459453	0.83[JPT][hapmap];0.83[YRI][hapmap]
rs1073607	0.83[JPT][hapmap]
rs10873200	1.00[CEU][hapmap];0.83[JPT][hapmap];0.98[EUR][1000 genomes]
rs11158655	0.82[ASW][hapmap];1.00[CEU][hapmap];0.80[CHD][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes]
rs12323494	0.82[CHB][hapmap];0.82[JPT][hapmap];0.83[YRI][hapmap]
rs12323911	0.90[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.90[YRI][hapmap]
rs12586552	0.88[YRI][hapmap]
rs12588292	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12588458	0.86[CHB][hapmap];0.98[CHD][hapmap];0.86[GIH][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs12588478	0.82[CHB][hapmap];0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs12589091	0.80[JPT][hapmap];0.85[YRI][hapmap]
rs12589218	0.83[JPT][hapmap];0.90[YRI][hapmap]
rs12589671	0.87[CHB][hapmap];0.83[JPT][hapmap];0.84[AMR][1000 genomes]
rs12590065	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12590952	0.81[AMR][1000 genomes]
rs12590956	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs1318914	0.83[JPT][hapmap];0.93[YRI][hapmap]
rs13379142	0.86[CHB][hapmap];0.81[JPT][hapmap];0.89[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs13379368	0.87[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1473732	0.85[ASN][1000 genomes]
rs1535491	0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap]
rs1536271	0.87[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1536272	0.82[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1536273	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1555853	0.88[GIH][hapmap]
rs17104103	0.82[ASW][hapmap];1.00[CEU][hapmap];0.82[CHD][hapmap];0.85[GIH][hapmap];0.83[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes]
rs17104106	1.00[CEU][hapmap];0.83[JPT][hapmap];0.98[EUR][1000 genomes]
rs17104109	0.83[JPT][hapmap]
rs17104114	0.84[CHD][hapmap];0.85[GIH][hapmap];0.84[MEX][hapmap]
rs17104202	0.85[ASN][1000 genomes]
rs17248526	0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.82[MKK][hapmap];0.90[YRI][hapmap]
rs17248616	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs17248714	0.84[AMR][1000 genomes]
rs1885589	0.82[CHB][hapmap];0.86[JPT][hapmap];0.90[YRI][hapmap]
rs1885590	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1980817	0.81[AMR][1000 genomes]
rs2031563	0.82[CHB][hapmap];0.82[CHD][hapmap];0.92[GIH][hapmap];0.83[MEX][hapmap];0.82[MKK][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes]
rs2031564	0.91[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs2057396	0.82[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap]
rs2094162	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2146229	0.82[CHB][hapmap];0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.82[MKK][hapmap]
rs2146230	0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.90[YRI][hapmap]
rs2236333	0.82[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap];0.81[AMR][1000 genomes]
rs2274335	0.87[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap];0.81[AMR][1000 genomes]
rs2274336	0.84[AMR][1000 genomes]
rs2274338	0.87[CHB][hapmap];0.83[JPT][hapmap];0.89[YRI][hapmap];0.84[AMR][1000 genomes]
rs2296560	0.87[CHB][hapmap];0.80[CHD][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes]
rs2296561	0.91[CHB][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs2296562	0.89[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2296563	0.91[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2319777	0.91[CHB][hapmap];1.00[CHD][hapmap];0.91[JPT][hapmap];0.92[ASN][1000 genomes]
rs28422832	0.84[AMR][1000 genomes]
rs28456209	0.84[AMR][1000 genomes]
rs28458235	0.81[AMR][1000 genomes]
rs28558916	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs28668536	0.84[AMR][1000 genomes]
rs3759755	0.87[CHB][hapmap];0.82[CHD][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.84[MKK][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs3784085	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3818467	0.87[CHB][hapmap];0.82[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes]
rs3818468	0.82[CHB][hapmap];0.92[GIH][hapmap];0.83[MEX][hapmap];0.81[AMR][1000 genomes]
rs3825722	0.84[AMR][1000 genomes]
rs4058254	0.81[CHB][hapmap];0.89[YRI][hapmap]
rs4636843	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs57154550	0.91[ASN][1000 genomes]
rs57234033	0.81[AMR][1000 genomes]
rs58257525	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60505324	0.88[ASN][1000 genomes]
rs61024303	0.98[EUR][1000 genomes]
rs6573760	0.82[CHD][hapmap]
rs6573765	0.87[CHB][hapmap];0.91[JPT][hapmap];0.85[ASN][1000 genomes]
rs6573768	0.93[ASN][1000 genomes]
rs66851210	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs67968914	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68002629	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7149535	0.83[JPT][hapmap];0.90[YRI][hapmap]
rs7152903	0.80[CHD][hapmap];0.92[GIH][hapmap];0.81[JPT][hapmap]
rs7153725	0.87[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];0.87[JPT][hapmap];0.94[MEX][hapmap];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7154607	0.95[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.92[ASN][1000 genomes]
rs7156441	0.87[CHB][hapmap];0.82[CHD][hapmap];0.95[GIH][hapmap];0.82[JPT][hapmap];0.83[MEX][hapmap];0.81[MKK][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs7157704	0.94[ASN][1000 genomes]
rs73276994	0.93[EUR][1000 genomes]
rs73280987	0.86[ASN][1000 genomes]
rs73282707	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73284812	0.81[AMR][1000 genomes]
rs73284892	0.90[ASN][1000 genomes]
rs8003327	0.91[ASN][1000 genomes]
rs8004148	0.82[CHD][hapmap];0.85[GIH][hapmap]
rs8004332	0.82[CHB][hapmap];0.92[GIH][hapmap];0.82[MEX][hapmap]
rs8004488	0.84[CHD][hapmap]
rs8005756	0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs8005876	0.87[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.94[MEX][hapmap];0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs8006042	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8006391	0.87[CHB][hapmap];0.82[JPT][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs8006519	0.88[ASW][hapmap];0.91[CHB][hapmap];0.86[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs8007033	0.87[CHB][hapmap];0.80[CHD][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.84[AMR][1000 genomes]
rs8007618	0.88[GIH][hapmap]
rs8007696	0.93[ASN][1000 genomes]
rs8007866	0.82[CHB][hapmap];0.95[JPT][hapmap];0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8008236	0.83[JPT][hapmap];0.90[YRI][hapmap]
rs8008443	0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.84[ASN][1000 genomes]
rs8008619	0.87[CHB][hapmap];0.82[CHD][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];0.83[MKK][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs8008724	0.87[CHB][hapmap];0.82[CHD][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.84[AMR][1000 genomes]
rs8009318	0.83[JPT][hapmap];0.86[YRI][hapmap]
rs8014966	0.81[CHB][hapmap];0.83[JPT][hapmap];0.90[YRI][hapmap]
rs8015641	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8015819	0.86[CHB][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs8015862	0.83[JPT][hapmap]
rs8016024	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8016037	0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap];0.83[YRI][hapmap]
rs8016623	0.81[AMR][1000 genomes]
rs8019109	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8020720	0.81[AMR][1000 genomes]
rs8020850	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8021896	0.82[CHB][hapmap];0.80[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap]
rs8021992	0.83[ASN][1000 genomes]
rs9323497	0.88[CHD][hapmap]
rs960797	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9743911	0.83[JPT][hapmap];0.89[YRI][hapmap]
rs9743912	0.83[ASW][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.91[JPT][hapmap];0.93[LWK][hapmap];0.84[MEX][hapmap];0.92[MKK][hapmap];0.90[TSI][hapmap];0.83[ASN][1000 genomes]
rs9743983	0.95[CHB][hapmap];0.95[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751285	chr14:67364747-67886781	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv1045518	chr14:67529049-67959582	Strong transcription Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv456331	chr14:67732861-68103780	Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
4	nsv564961	chr14:67732861-68103780	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
5	nsv470651	chr14:67732861-68113293	Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
6	nsv1054389	chr14:67804987-67922598	Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
7	nsv542121	chr14:67804987-67922598	Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs6573769	EIF2S1	Cis_1M	lymphoblastoid	RTeQTL
rs6573769	ATP6V1D	cis	lymphoblastoid	seeQTL
rs6573769	ATP6V1D	cis	Thyroid	GTEx
rs6573769	EIF2S1	cis	lymphoblastoid	seeQTL

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67827800-67831600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr14:67827800-67831800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr14:67827800-67832800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr14:67827800-67833600	Weak transcription	Lung	lung
5	chr14:67827800-67834000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr14:67827800-67834000	Weak transcription	Gastric	stomach
7	chr14:67827800-67834800	Weak transcription	Esophagus	oesophagus
8	chr14:67828000-67832000	Weak transcription	Colonic Mucosa	Colon
9	chr14:67828200-67831600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr14:67828200-67831600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
11	chr14:67828200-67833600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr14:67828200-67841600	Weak transcription	Aorta	Aorta
13	chr14:67828400-67831600	Weak transcription	Primary neutrophils fromperipheralblood	blood
14	chr14:67828400-67831800	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr14:67828400-67832000	Weak transcription	Stomach Smooth Muscle	stomach
16	chr14:67828400-67832200	Weak transcription	Thymus	Thymus
17	chr14:67828400-67832800	Weak transcription	Fetal Intestine Small	intestine
18	chr14:67828400-67837800	Weak transcription	Right Ventricle	heart
19	chr14:67828400-67854000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr14:67828600-67831600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr14:67828600-67832000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
22	chr14:67828600-67832000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
23	chr14:67828600-67832600	Weak transcription	Fetal Kidney	kidney
24	chr14:67828600-67832800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr14:67828600-67832800	Weak transcription	Fetal Stomach	stomach
26	chr14:67828600-67838000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
27	chr14:67828600-67854600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr14:67828800-67832200	Weak transcription	Primary B cells from cord blood	blood
29	chr14:67828800-67832200	Weak transcription	Rectal Smooth Muscle	rectum
30	chr14:67828800-67854000	Strong transcription	HUES64 Cell Line	embryonic stem cell
31	chr14:67829000-67831800	Genic enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr14:67829000-67832000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr14:67829000-67832000	Weak transcription	Colon Smooth Muscle	Colon
34	chr14:67829000-67855200	Strong transcription	Fetal Thymus	thymus
35	chr14:67829200-67836400	Strong transcription	NH-A	brain
36	chr14:67829200-67852000	Strong transcription	Placenta	Placenta
37	chr14:67829200-67853200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr14:67829200-67853600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
39	chr14:67829400-67831600	Weak transcription	Fetal Intestine Large	intestine
40	chr14:67829400-67832000	Weak transcription	Brain Germinal Matrix	brain
41	chr14:67829400-67833400	Weak transcription	Spleen	Spleen
42	chr14:67829400-67833600	Weak transcription	Pancreas	Pancrea
43	chr14:67829400-67838200	Weak transcription	Stomach Mucosa	stomach
44	chr14:67829400-67841200	Genic enhancers	Primary T helper cells PMA-I stimulated	--
45	chr14:67829400-67853600	Strong transcription	Primary B cells from peripheral blood	blood
46	chr14:67829400-67854000	Strong transcription	HUES48 Cell Line	embryonic stem cell
47	chr14:67829400-67854200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr14:67829400-67854200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
49	chr14:67829600-67854800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr14:67829800-67831600	Weak transcription	Skeletal Muscle Female	skeletal muscle

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