The 2.0 version of rSNPBase

Variant report

Variant rs12605275
Chromosome Location chr18:43839925-43839926
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43825400-43844200 Weak transcription Fetal Brain Female brain
2 chr18:43826200-43840000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr18:43826600-43847000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr18:43826800-43843600 Weak transcription Brain Germinal Matrix brain
5 chr18:43829200-43840400 Weak transcription K562 blood
6 chr18:43829200-43842800 Weak transcription Fetal Muscle Leg muscle
7 chr18:43830000-43854200 Weak transcription Esophagus oesophagus
8 chr18:43830400-43842800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr18:43830600-43847400 Weak transcription Pancreas Pancrea
10 chr18:43830800-43842600 Weak transcription Gastric stomach
11 chr18:43831000-43840000 Weak transcription Rectal Smooth Muscle rectum
12 chr18:43831000-43840200 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr18:43831000-43840200 Weak transcription Brain Angular Gyrus brain
14 chr18:43831000-43842800 Weak transcription Small Intestine intestine
15 chr18:43831000-43844600 Weak transcription Spleen Spleen
16 chr18:43831000-43851400 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr18:43831200-43840200 Weak transcription Stomach Mucosa stomach
18 chr18:43831200-43842800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr18:43831200-43843000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr18:43831400-43840200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr18:43831400-43840400 Weak transcription Primary hematopoietic stem cells blood
22 chr18:43831400-43841000 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr18:43831400-43842000 Weak transcription Fetal Intestine Large intestine
24 chr18:43831400-43842600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr18:43831400-43842600 Weak transcription Duodenum Mucosa Duodenum
26 chr18:43831400-43842800 Weak transcription Brain Substantia Nigra brain
27 chr18:43831400-43842800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr18:43831400-43848000 Weak transcription Fetal Kidney kidney
29 chr18:43831400-43863200 Weak transcription Fetal Intestine Small intestine
30 chr18:43831600-43840200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr18:43831600-43842600 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr18:43831600-43842600 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr18:43831600-43842800 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr18:43831600-43842800 Weak transcription Hela-S3 cervix
35 chr18:43833400-43843000 Weak transcription Adipose Nuclei Adipose
36 chr18:43833600-43842800 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr18:43833800-43856800 Weak transcription Aorta Aorta
38 chr18:43834400-43840000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr18:43834400-43840000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr18:43834400-43841800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr18:43834600-43840000 Weak transcription Colon Smooth Muscle Colon
42 chr18:43834600-43842800 Weak transcription Fetal Muscle Trunk muscle
43 chr18:43834600-43844000 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr18:43834800-43840000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr18:43834800-43840000 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr18:43834800-43842600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr18:43834800-43842600 Weak transcription Liver Liver
48 chr18:43834800-43849000 Weak transcription HUVEC blood vessel
49 chr18:43835000-43842800 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr18:43835000-43842800 Weak transcription HepG2 liver

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Last update: Aug 31, 2015