The 2.0 version of rSNPBase

Variant report

Variant rs12965578
Chromosome Location chr18:43779196-43779197
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43755200-43780400 Weak transcription Aorta Aorta
2 chr18:43755600-43795600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr18:43755800-43779600 Weak transcription Thymus Thymus
4 chr18:43756800-43796000 Weak transcription Esophagus oesophagus
5 chr18:43758000-43782200 Weak transcription Right Ventricle heart
6 chr18:43758800-43785000 Weak transcription Fetal Thymus thymus
7 chr18:43761200-43796000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr18:43761800-43779800 Weak transcription Ovary ovary
9 chr18:43762800-43779600 Weak transcription Primary monocytes fromperipheralblood blood
10 chr18:43763000-43779400 Weak transcription Muscle Satellite Cultured Cells --
11 chr18:43763000-43785000 Weak transcription Small Intestine intestine
12 chr18:43763000-43795800 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr18:43763400-43780400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr18:43763400-43784400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr18:43763400-43799200 Weak transcription Stomach Smooth Muscle stomach
16 chr18:43763600-43779600 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr18:43763600-43796000 Weak transcription Fetal Lung lung
18 chr18:43764600-43795800 Weak transcription Lung lung
19 chr18:43765200-43779800 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr18:43765600-43779400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr18:43765600-43782000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr18:43765600-43784200 Weak transcription Primary B cells from cord blood blood
23 chr18:43766000-43781800 Weak transcription Primary hematopoietic stem cells blood
24 chr18:43766000-43783200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr18:43768800-43779600 Weak transcription Fetal Intestine Large intestine
26 chr18:43768800-43783000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr18:43769000-43779600 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr18:43769200-43802800 Weak transcription Brain Hippocampus Middle brain
29 chr18:43769800-43780000 Weak transcription Stomach Mucosa stomach
30 chr18:43769800-43784200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr18:43770800-43796000 Weak transcription Brain Substantia Nigra brain
32 chr18:43771600-43779800 Weak transcription Right Atrium heart
33 chr18:43771800-43795800 Weak transcription Brain Anterior Caudate brain
34 chr18:43772000-43795800 Weak transcription Adipose Nuclei Adipose
35 chr18:43772000-43795800 Weak transcription Brain Cingulate Gyrus brain
36 chr18:43772200-43796000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr18:43772800-43783000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr18:43772800-43795800 Weak transcription Fetal Muscle Trunk muscle
39 chr18:43773200-43779600 Weak transcription Psoas Muscle Psoas
40 chr18:43773400-43779600 Weak transcription Liver Liver
41 chr18:43773800-43779800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr18:43774000-43780000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr18:43774200-43783800 Weak transcription GM12878-XiMat blood
44 chr18:43774400-43795800 Weak transcription Fetal Stomach stomach
45 chr18:43775200-43783200 Weak transcription Fetal Brain Female brain
46 chr18:43776400-43802000 Weak transcription Brain Germinal Matrix brain
47 chr18:43776800-43779400 Weak transcription Osteobl bone
48 chr18:43776800-43783000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr18:43776800-43795800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr18:43777000-43779600 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015