The 2.0 version of rSNPBase

Variant report

Variant rs8090542
Chromosome Location chr18:43771364-43771365
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43755200-43780400 Weak transcription Aorta Aorta
2 chr18:43755600-43776200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr18:43755600-43795600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr18:43755800-43776800 Weak transcription Fetal Muscle Leg muscle
5 chr18:43755800-43779600 Weak transcription Thymus Thymus
6 chr18:43756600-43771600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr18:43756800-43796000 Weak transcription Esophagus oesophagus
8 chr18:43758000-43782200 Weak transcription Right Ventricle heart
9 chr18:43758800-43773000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr18:43758800-43775000 Weak transcription Dnd41 blood
11 chr18:43758800-43785000 Weak transcription Fetal Thymus thymus
12 chr18:43761200-43796000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr18:43761800-43779800 Weak transcription Ovary ovary
14 chr18:43762400-43779000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr18:43762800-43779600 Weak transcription Primary monocytes fromperipheralblood blood
16 chr18:43763000-43776800 Weak transcription HSMM muscle
17 chr18:43763000-43779400 Weak transcription Muscle Satellite Cultured Cells --
18 chr18:43763000-43785000 Weak transcription Small Intestine intestine
19 chr18:43763000-43795800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr18:43763200-43771800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr18:43763200-43776600 Weak transcription NH-A brain
22 chr18:43763200-43776800 Weak transcription Colon Smooth Muscle Colon
23 chr18:43763400-43780400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr18:43763400-43784400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr18:43763400-43799200 Weak transcription Stomach Smooth Muscle stomach
26 chr18:43763600-43776600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr18:43763600-43779600 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr18:43763600-43796000 Weak transcription Fetal Lung lung
29 chr18:43764600-43795800 Weak transcription Lung lung
30 chr18:43764800-43771600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr18:43764800-43773000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr18:43765200-43779800 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr18:43765400-43772800 Weak transcription Primary B cells from peripheral blood blood
34 chr18:43765400-43779000 Weak transcription K562 blood
35 chr18:43765600-43772800 Weak transcription HMEC breast
36 chr18:43765600-43776600 Weak transcription Hela-S3 cervix
37 chr18:43765600-43777000 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr18:43765600-43779000 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr18:43765600-43779400 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr18:43765600-43782000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr18:43765600-43784200 Weak transcription Primary B cells from cord blood blood
42 chr18:43765800-43778600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr18:43766000-43781800 Weak transcription Primary hematopoietic stem cells blood
44 chr18:43766000-43783200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr18:43766400-43772800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr18:43767200-43774000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr18:43768600-43772800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr18:43768600-43774000 Weak transcription Fetal Stomach stomach
49 chr18:43768800-43771800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr18:43768800-43772200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015