The 2.0 version of rSNPBase

Variant report

Variant rs4890321
Chromosome Location chr18:43826819-43826820
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43796600-43827600 Weak transcription Fetal Muscle Leg muscle
2 chr18:43797000-43833400 Weak transcription Fetal Muscle Trunk muscle
3 chr18:43797400-43829600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr18:43798800-43833800 Weak transcription HepG2 liver
5 chr18:43799000-43834000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr18:43800800-43829000 Weak transcription HSMM muscle
7 chr18:43801200-43829600 Weak transcription Thymus Thymus
8 chr18:43802800-43828200 Weak transcription Primary B cells from peripheral blood blood
9 chr18:43802800-43830000 Weak transcription Brain Substantia Nigra brain
10 chr18:43803600-43827800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr18:43804800-43829400 Weak transcription Primary hematopoietic stem cells blood
12 chr18:43805200-43828200 Weak transcription GM12878-XiMat blood
13 chr18:43805400-43827600 Weak transcription Fetal Thymus thymus
14 chr18:43805400-43829800 Weak transcription Fetal Intestine Large intestine
15 chr18:43806400-43827600 Weak transcription Duodenum Mucosa Duodenum
16 chr18:43806400-43829000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr18:43808200-43828800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr18:43810000-43829000 Weak transcription Esophagus oesophagus
19 chr18:43810200-43828000 Weak transcription Lung lung
20 chr18:43810200-43829400 Weak transcription Fetal Intestine Small intestine
21 chr18:43810200-43832400 Weak transcription Aorta Aorta
22 chr18:43810400-43827800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr18:43815200-43830000 Weak transcription Brain Cingulate Gyrus brain
24 chr18:43815400-43828800 Weak transcription Psoas Muscle Psoas
25 chr18:43815400-43828800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr18:43815400-43829000 Weak transcription Right Ventricle heart
27 chr18:43815400-43829400 Weak transcription Left Ventricle heart
28 chr18:43815400-43830000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr18:43815400-43830000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr18:43815400-43830200 Weak transcription Gastric stomach
31 chr18:43815600-43829000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr18:43815600-43829600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr18:43815600-43829600 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr18:43815800-43827600 Weak transcription Primary B cells from cord blood blood
35 chr18:43815800-43827600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr18:43815800-43829000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr18:43815800-43829000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr18:43815800-43829400 Weak transcription Rectal Smooth Muscle rectum
39 chr18:43815800-43830000 Weak transcription Brain Angular Gyrus brain
40 chr18:43816800-43829400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr18:43817600-43829800 Weak transcription Pancreas Pancrea
42 chr18:43817600-43830200 Weak transcription Stomach Smooth Muscle stomach
43 chr18:43818600-43828800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr18:43819200-43828800 Weak transcription HMEC breast
45 chr18:43819600-43829600 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr18:43819600-43829600 Weak transcription NHLF lung
47 chr18:43819800-43827600 Weak transcription NHEK skin
48 chr18:43820200-43827600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr18:43820200-43829600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr18:43820200-43829600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015