Variant report

Variant	rs12614697
Chromosome Location	chr2:180541851-180541852
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10196048	0.84[CEU][hapmap]
rs10497543	0.84[CEU][hapmap]
rs11901346	0.86[CEU][hapmap]
rs12623583	0.81[YRI][hapmap]
rs16866915	0.80[CEU][hapmap]
rs3106689	0.80[CEU][hapmap]
rs3112968	0.86[CEU][hapmap]
rs3112970	0.86[CEU][hapmap]
rs6745521	0.84[CEU][hapmap]
rs7421557	0.86[CEU][hapmap]
rs952507	0.92[CEU][hapmap];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180537400-180542400	Weak transcription	Fetal Intestine Large	intestine
2	chr2:180540400-180571200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:180540600-180543000	Weak transcription	Pancreas	Pancrea
4	chr2:180541200-180542000	Enhancers	Fetal Muscle Leg	muscle
5	chr2:180541200-180542000	Enhancers	Fetal Stomach	stomach
6	chr2:180541200-180542200	Enhancers	Duodenum Smooth Muscle	Duodenum
7	chr2:180541200-180542200	Enhancers	Psoas Muscle	Psoas
8	chr2:180541200-180542600	Enhancers	Liver	Liver
9	chr2:180541200-180543000	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr2:180541200-180543200	Enhancers	Fetal Lung	lung
11	chr2:180541200-180543800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr2:180541200-180544000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr2:180541400-180542000	Enhancers	GM12878-XiMat	blood
14	chr2:180541400-180542000	Enhancers	Osteobl	bone
15	chr2:180541400-180542200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr2:180541400-180542200	Enhancers	Brain Angular Gyrus	brain
17	chr2:180541400-180542200	Enhancers	Fetal Brain Female	brain
18	chr2:180541400-180542400	Enhancers	Muscle Satellite Cultured Cells	--
19	chr2:180541400-180542600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr2:180541400-180542600	Enhancers	Brain Anterior Caudate	brain
21	chr2:180541400-180542600	Enhancers	HSMM	muscle
22	chr2:180541400-180543200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr2:180541400-180543200	Enhancers	Colon Smooth Muscle	Colon
24	chr2:180541600-180542000	Enhancers	Adipose Nuclei	Adipose
25	chr2:180541600-180542000	Flanking Active TSS	HSMMtube	muscle
26	chr2:180541600-180542200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr2:180541600-180542800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
28	chr2:180541600-180543000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr2:180541800-180542000	Enhancers	Fetal Brain Male	brain
30	chr2:180541800-180542000	Enhancers	Fetal Heart	heart
31	chr2:180541800-180542200	Enhancers	Breast Myoepithelial Primary Cells	Breast
32	chr2:180541800-180542200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
33	chr2:180541800-180543000	Weak transcription	Left Ventricle	heart

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