Variant report

Variant	rs6745521
Chromosome Location	chr2:180480167-180480168
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10196048	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[TSI][hapmap];0.86[EUR][1000 genomes]
rs10497542	0.92[CEU][hapmap]
rs10497543	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[TSI][hapmap];0.87[EUR][1000 genomes]
rs12614697	0.84[CEU][hapmap]
rs16866815	1.00[CEU][hapmap]
rs16866838	1.00[CEU][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17819172	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17820146	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6733764	1.00[YRI][hapmap];0.95[AFR][1000 genomes]
rs7584878	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180477400-180488200	Weak transcription	Pancreas	Pancrea
2	chr2:180477800-180484200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:180478000-180483000	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr2:180478800-180481200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr2:180478800-180488200	Weak transcription	Lung	lung
6	chr2:180479000-180487400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr2:180479600-180483400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr2:180479600-180483600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr2:180480000-180483400	Weak transcription	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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