Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:180441137..180442663-chr2:180445038..180447990,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10179050	0.81[CEU][hapmap]
rs10196048	0.92[CEU][hapmap]
rs10497543	0.92[CEU][hapmap]
rs11885342	0.90[ASN][1000 genomes]
rs1356069	0.86[CHB][hapmap]
rs1515306	1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs1515310	0.84[CHB][hapmap];0.94[JPT][hapmap]
rs1515311	0.81[CEU][hapmap]
rs16866810	0.85[CHB][hapmap]
rs16866814	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16866815	0.92[CEU][hapmap];0.84[JPT][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16866822	0.89[JPT][hapmap]
rs16866838	0.92[CEU][hapmap]
rs16866842	0.89[JPT][hapmap]
rs17817559	0.94[EUR][1000 genomes]
rs17818050	0.84[CHB][hapmap];0.81[ASN][1000 genomes]
rs17819172	0.92[CEU][hapmap]
rs17820146	0.92[CEU][hapmap]
rs3106713	0.85[CHB][hapmap]
rs3106714	0.90[CHB][hapmap]
rs4894109	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs6745521	0.92[CEU][hapmap]
rs73039384	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7584878	0.92[CEU][hapmap]
rs908287	0.85[CHB][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521639	chr2:180439541-180443444	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180433000-180445600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr2:180435200-180461000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr2:180435400-180446400	Weak transcription	Fetal Kidney	kidney
4	chr2:180437600-180445200	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr2:180439400-180443200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr2:180439400-180445000	Weak transcription	Stomach Mucosa	stomach
7	chr2:180439600-180443000	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr2:180439800-180443000	Weak transcription	Fetal Intestine Large	intestine
9	chr2:180439800-180445200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr2:180439800-180445200	Weak transcription	Fetal Lung	lung
11	chr2:180439800-180446400	Enhancers	Liver	Liver
12	chr2:180441000-180442400	Weak transcription	HepG2	liver
13	chr2:180441200-180445200	Weak transcription	Pancreas	Pancrea

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