Variant report

Variant	rs12642262
Chromosome Location	chr4:81315199-81315200
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1039050	0.82[AFR][1000 genomes]
rs1039051	0.81[AFR][1000 genomes]
rs1495483	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1495485	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs1495488	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1874334	0.82[AFR][1000 genomes]
rs2007145	0.83[AMR][1000 genomes]
rs4693021	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4693100	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4693384	0.83[AMR][1000 genomes]
rs4693688	0.81[AFR][1000 genomes]
rs6534890	0.83[AMR][1000 genomes]
rs6826195	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7665080	0.89[AFR][1000 genomes]
rs7691290	0.89[AFR][1000 genomes]
rs9917963	0.82[AFR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81314000-81315200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:81314600-81315200	Enhancers	HMEC	breast
3	chr4:81314800-81315200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr4:81315000-81328600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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