The 2.0 version of rSNPBase

Variant report

Variant rs12670221
Chromosome Location chr7:38888799-38888800
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38835600-38900800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:38858600-38901600 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr7:38858800-38907600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr7:38859000-38895200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr7:38859800-38900800 Weak transcription Primary T cells fromperipheralblood blood
6 chr7:38860600-38900200 Weak transcription Fetal Intestine Large intestine
7 chr7:38867400-38905200 Weak transcription Left Ventricle heart
8 chr7:38870000-38895600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr7:38870200-38895600 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr7:38871400-38905800 Weak transcription Aorta Aorta
11 chr7:38871400-38920000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr7:38871600-38906000 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr7:38873000-38907600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr7:38873200-38889200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr7:38873200-38919200 Weak transcription Pancreas Pancrea
16 chr7:38875800-38897400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr7:38876400-38906200 Weak transcription Duodenum Mucosa Duodenum
18 chr7:38877000-38895600 Weak transcription Spleen Spleen
19 chr7:38877200-38900800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr7:38877200-38901200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr7:38877400-38896200 Weak transcription Primary hematopoietic stem cells blood
22 chr7:38879800-38891800 Weak transcription Right Atrium heart
23 chr7:38879800-38938000 Weak transcription Right Ventricle heart
24 chr7:38880200-38897600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr7:38880600-38888800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr7:38880600-38888800 Weak transcription Lung lung
27 chr7:38880600-38900600 Weak transcription Adipose Nuclei Adipose
28 chr7:38880800-38905600 Weak transcription Fetal Muscle Leg muscle
29 chr7:38881200-38888800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr7:38881200-38888800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr7:38881200-38895000 Weak transcription GM12878-XiMat blood
32 chr7:38881200-38898000 Weak transcription HSMMtube muscle
33 chr7:38881200-38898000 Weak transcription NHLF lung
34 chr7:38881200-38900000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr7:38881200-38907600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr7:38881200-38919200 Weak transcription Psoas Muscle Psoas
37 chr7:38881400-38898000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr7:38882000-38890200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr7:38883400-38907600 Weak transcription Esophagus oesophagus
40 chr7:38884600-38905600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr7:38884800-38889200 Weak transcription Gastric stomach
42 chr7:38885000-38893800 Weak transcription Small Intestine intestine
43 chr7:38885000-38900800 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr7:38885200-38888800 Weak transcription Ovary ovary
45 chr7:38885800-38897200 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr7:38886200-38889200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr7:38886200-38890600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr7:38886200-38893000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr7:38886200-38901400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr7:38886200-38947800 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015