Variant report

Variant	rs12701303
Chromosome Location	chr7:33583927-33583928
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10486538	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12701304	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13226155	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13226813	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs16879168	0.86[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933018	chr7:33506325-33707270	Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv830945	chr7:33526648-33670592	Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:33569000-33584000	Weak transcription	Right Ventricle	heart
2	chr7:33572000-33587200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:33574600-33584000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:33574600-33584400	Weak transcription	Gastric	stomach
5	chr7:33574600-33594200	Weak transcription	Aorta	Aorta
6	chr7:33575000-33585800	Weak transcription	Fetal Stomach	stomach
7	chr7:33576000-33587600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr7:33576200-33584400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr7:33576200-33584600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr7:33577800-33589200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
11	chr7:33579000-33584000	Weak transcription	Right Atrium	heart
12	chr7:33579000-33599000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr7:33579000-33602800	Weak transcription	Fetal Lung	lung
14	chr7:33579200-33584000	Weak transcription	Fetal Muscle Leg	muscle
15	chr7:33579200-33584000	Weak transcription	Left Ventricle	heart
16	chr7:33579200-33584200	Weak transcription	Brain Substantia Nigra	brain
17	chr7:33579200-33598800	Weak transcription	Primary T helper cells fromperipheralblood	blood
18	chr7:33579400-33594000	Weak transcription	HSMM	muscle
19	chr7:33579800-33590000	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr7:33580000-33589400	Weak transcription	Fetal Heart	heart
21	chr7:33580800-33584000	Weak transcription	HSMMtube	muscle
22	chr7:33580800-33584200	Weak transcription	Psoas Muscle	Psoas
23	chr7:33581000-33584200	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr7:33581000-33601800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr7:33583800-33584200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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