Variant report

Variant	rs12701859
Chromosome Location	chr7:41072834-41072835
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs13239757	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1548630	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1859700	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1990137	0.81[EUR][1000 genomes]
rs1990138	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6462998	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:41062800-41082200	Weak transcription	Aorta	Aorta
2	chr7:41066600-41073600	Enhancers	NH-A	brain
3	chr7:41069200-41074600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr7:41069400-41082000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr7:41070400-41073600	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr7:41070600-41073000	Weak transcription	NHDF-Ad	bronchial
7	chr7:41070600-41075200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr7:41070600-41076600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr7:41070800-41073000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr7:41071000-41073200	Enhancers	Placenta Amnion	Placenta Amnion
11	chr7:41072400-41073600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr7:41072400-41074600	Weak transcription	Dnd41	blood
13	chr7:41072800-41073200	Enhancers	Osteobl	bone
14	chr7:41072800-41073400	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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