Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:91569478..91571277-chr13:91572138..91574346,2	K562	blood:
2	chr13:91567416..91569348-chr13:91571429..91575596,3	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1031397	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1542294	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1547339	0.83[ASN][1000 genomes]
rs2218906	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4238295	0.83[ASN][1000 genomes]
rs4264263	0.85[ASN][1000 genomes]
rs4347494	0.85[ASN][1000 genomes]
rs4378502	0.85[ASN][1000 genomes]
rs4514538	0.85[ASN][1000 genomes]
rs4584688	0.83[ASN][1000 genomes]
rs6492513	0.85[ASN][1000 genomes]
rs6492517	0.85[ASN][1000 genomes]
rs67609503	0.85[ASN][1000 genomes]
rs7321153	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7324977	0.85[ASN][1000 genomes]
rs7333894	0.83[ASN][1000 genomes]
rs7983743	0.81[ASN][1000 genomes]
rs8000102	0.85[ASN][1000 genomes]
rs8003008	0.83[ASN][1000 genomes]
rs9515865	0.85[ASN][1000 genomes]
rs9515866	0.85[ASN][1000 genomes]
rs9515869	0.81[ASN][1000 genomes]
rs9523189	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9523200	0.83[ASN][1000 genomes]
rs9523202	0.85[ASN][1000 genomes]
rs9523206	0.85[ASN][1000 genomes]
rs9523208	0.85[ASN][1000 genomes]
rs9523225	0.81[ASN][1000 genomes]
rs958368	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs961617	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948709	chr13:90753085-91745571	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
2	nsv932206	chr13:91370888-91878374	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv1042947	chr13:91571040-92416897	Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1946 gene(s)	inside rSNPs	diseases
4	nsv541871	chr13:91571040-92416897	Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1946 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:91559600-91581000	Weak transcription	Right Atrium	heart
2	chr13:91571600-91572400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr13:91572000-91578200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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