Variant report
| Variant | rs12763583 |
|---|---|
| Chromosome Location | chr10:61712666-61712667 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:61665570..61668112-chr10:61711557..61714802,3 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000108091 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:15)
| rs_ID | r2[population] |
|---|---|
| rs1171833 | 0.85[ASN][1000 genomes] |
| rs12776024 | 0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12784462 | 0.81[ASN][1000 genomes] |
| rs1664278 | 0.94[ASN][1000 genomes] |
| rs1664279 | 0.94[ASN][1000 genomes] |
| rs1664280 | 0.94[ASN][1000 genomes] |
| rs1664281 | 0.94[ASN][1000 genomes] |
| rs1684904 | 0.94[ASN][1000 genomes] |
| rs1684916 | 0.94[ASN][1000 genomes] |
| rs2166270 | 0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs2166271 | 0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs2440916 | 0.94[ASN][1000 genomes] |
| rs2440918 | 0.94[ASN][1000 genomes] |
| rs2450462 | 0.94[ASN][1000 genomes] |
| rs2450463 | 0.94[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
