Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:61695241..61697293-chr10:61702502..61705874,3	MCF-7	breast:
2	chr10:61694085..61696780-chr10:61751224..61753093,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1171833	0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1183347	0.95[EUR][1000 genomes]
rs12572828	0.85[EUR][1000 genomes]
rs12573055	0.86[EUR][1000 genomes]
rs12763583	0.94[ASN][1000 genomes]
rs12776024	0.94[ASN][1000 genomes]
rs1664276	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1664278	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1664279	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1664280	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1684904	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1684916	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1972950	0.86[EUR][1000 genomes]
rs2166270	0.94[ASN][1000 genomes]
rs2166271	0.94[ASN][1000 genomes]
rs2440916	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2440918	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2450462	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2450463	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2450464	0.86[EUR][1000 genomes]
rs56221953	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1800316	chr10:61639599-61700473	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61694200-61695600	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr10:61695400-61695600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr10:61695400-61695600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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