Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:61703565..61709814-chr10:61724833..61727412,7	MCF-7	breast:
2	chr10:61707056..61709767-chr10:61725475..61727127,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1171833	0.85[CHB][hapmap];0.83[CHD][hapmap];0.85[ASN][1000 genomes]
rs12763583	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12776024	1.00[CHB][hapmap];0.94[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.92[TSI][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12784462	0.81[ASN][1000 genomes]
rs1624715	0.85[CHB][hapmap]
rs1664254	0.84[CHB][hapmap]
rs1664257	0.85[CHB][hapmap]
rs1664258	0.85[CHB][hapmap];0.82[CHD][hapmap]
rs1664260	0.82[CHD][hapmap]
rs1664262	0.85[CHB][hapmap]
rs1664278	0.94[ASN][1000 genomes]
rs1664279	0.94[ASN][1000 genomes]
rs1664280	0.94[ASN][1000 genomes]
rs1664281	0.94[ASN][1000 genomes]
rs1684898	0.85[CHB][hapmap]
rs1684900	0.85[CHB][hapmap]
rs1684902	0.84[CHB][hapmap]
rs1684904	0.94[ASN][1000 genomes]
rs1684916	0.94[ASN][1000 genomes]
rs1822913	0.81[MEX][hapmap]
rs2166270	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2440906	0.85[CHB][hapmap]
rs2440910	0.85[CHB][hapmap]
rs2440916	0.94[ASN][1000 genomes]
rs2440918	1.00[CHB][hapmap];0.94[ASN][1000 genomes]
rs2450462	0.94[ASN][1000 genomes]
rs2450463	0.94[ASN][1000 genomes]
rs2450468	0.85[CHB][hapmap]
rs3763745	0.81[MEX][hapmap]
rs4948368	0.81[MEX][hapmap]
rs895243	0.85[CHB][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs2166271	CBLN4	trans	cerebellum	SCAN
rs2166271	SLC16A9	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61708200-61710400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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