The 2.0 version of rSNPBase

Variant report

Variant rs12765350
Chromosome Location chr10:116635305-116635306
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116589600-116640600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr10:116609600-116639400 Weak transcription Pancreas Pancrea
3 chr10:116611600-116641000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr10:116617400-116640600 Weak transcription Fetal Intestine Small intestine
5 chr10:116619400-116636000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr10:116619400-116636400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr10:116619400-116641600 Weak transcription Aorta Aorta
8 chr10:116621400-116636000 Weak transcription Right Ventricle heart
9 chr10:116621800-116639600 Weak transcription H1 Cell Line embryonic stem cell
10 chr10:116621800-116639600 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr10:116622000-116639200 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr10:116622200-116639000 Weak transcription A549 lung
13 chr10:116622600-116636800 Weak transcription Brain Germinal Matrix brain
14 chr10:116622800-116636400 Weak transcription Ovary ovary
15 chr10:116624400-116636800 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr10:116624400-116639200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr10:116624800-116636200 Weak transcription Placenta Placenta
18 chr10:116624800-116636600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr10:116624800-116636600 Weak transcription Brain Anterior Caudate brain
20 chr10:116625400-116636200 Weak transcription Liver Liver
21 chr10:116628600-116636400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr10:116630000-116635800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr10:116630000-116636200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr10:116630400-116636400 Weak transcription NHLF lung
25 chr10:116630600-116636400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr10:116630600-116636400 Weak transcription Muscle Satellite Cultured Cells --
27 chr10:116631400-116639000 Weak transcription NHDF-Ad bronchial
28 chr10:116632800-116636400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr10:116632800-116636600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr10:116633000-116636400 Weak transcription HSMM muscle
31 chr10:116633000-116636600 Weak transcription HSMMtube muscle
32 chr10:116634400-116637000 Enhancers Primary neutrophils fromperipheralblood blood
33 chr10:116634600-116635400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr10:116634600-116635400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr10:116634600-116635400 Enhancers GM12878-XiMat blood
36 chr10:116634600-116637000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr10:116634600-116637200 Enhancers Primary monocytes fromperipheralblood blood
38 chr10:116634800-116635400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
39 chr10:116634800-116635400 Enhancers Fetal Muscle Trunk muscle
40 chr10:116634800-116635400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
41 chr10:116634800-116637000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr10:116635000-116636600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr10:116635200-116635400 Enhancers Primary B cells from cord blood blood
44 chr10:116635200-116635400 Enhancers Primary hematopoietic stem cells blood
45 chr10:116635200-116635400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr10:116635200-116635600 Flanking Active TSS HepG2 liver
47 chr10:116635200-116636200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr10:116635200-116636400 Weak transcription Adipose Nuclei Adipose
49 chr10:116635200-116636400 Weak transcription NH-A brain
50 chr10:116635200-116636600 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015