Variant report

Variant	rs12785891
Chromosome Location	chr11:121252068-121252069
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10750191	0.93[ASN][1000 genomes]
rs12575786	0.98[ASN][1000 genomes]
rs1560405	0.93[ASN][1000 genomes]
rs1560408	0.93[ASN][1000 genomes]
rs297490	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs297491	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs297492	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs57320113	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6589879	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6589880	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7102251	0.83[EUR][1000 genomes]
rs7102477	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7114953	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7116595	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs99672	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs12785891	C11orf32	Cis_1M	lymphoblastoid	RTeQTL
rs12785891	SORL1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121239600-121259200	Weak transcription	Psoas Muscle	Psoas
2	chr11:121244800-121260200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr11:121250400-121253000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr11:121251200-121252800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr11:121251200-121264800	Weak transcription	Primary T cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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