Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11158956	0.88[ASN][1000 genomes]
rs11623104	0.82[ASN][1000 genomes]
rs11626915	0.84[ASN][1000 genomes]
rs12587980	0.90[JPT][hapmap]
rs2238180	0.95[CHB][hapmap];0.89[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2238183	1.00[CHB][hapmap];0.89[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2238186	0.86[JPT][hapmap]
rs2238187	0.83[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.89[ASN][1000 genomes]
rs2239277	0.81[CHD][hapmap]
rs2283380	0.83[CEU][hapmap];0.81[TSI][hapmap]
rs3784045	0.84[CHB][hapmap];0.92[CHD][hapmap];0.85[JPT][hapmap];0.89[ASN][1000 genomes]
rs3784047	0.84[CHB][hapmap];0.92[CHD][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs3825714	0.89[ASN][1000 genomes]
rs4903016	0.84[CHB][hapmap];0.81[CHD][hapmap];0.85[JPT][hapmap]
rs4903024	0.86[JPT][hapmap]
rs7153117	0.86[ASN][1000 genomes]
rs7156512	0.84[CHB][hapmap];0.92[CHD][hapmap];0.85[JPT][hapmap];0.89[ASN][1000 genomes]
rs758266	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs758267	0.84[CHB][hapmap];0.86[CHD][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs917428	0.81[CHD][hapmap];0.89[GIH][hapmap];0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72918000-72924400	Weak transcription	Spleen	Spleen
2	chr14:72918000-72930000	Weak transcription	Right Atrium	heart
3	chr14:72918200-72929000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr14:72918200-72930000	Weak transcription	Left Ventricle	heart
5	chr14:72918400-72924200	Weak transcription	HSMM	muscle
6	chr14:72918800-72924200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr14:72919000-72924200	Weak transcription	NH-A	brain
8	chr14:72919000-72931400	Weak transcription	Adipose Nuclei	Adipose
9	chr14:72919400-72926800	Weak transcription	Fetal Intestine Small	intestine
10	chr14:72919400-72945200	Weak transcription	Brain Germinal Matrix	brain
11	chr14:72919800-72924000	Weak transcription	HSMMtube	muscle
12	chr14:72919800-72924400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr14:72919800-72927400	Weak transcription	Fetal Muscle Leg	muscle
14	chr14:72921400-72924400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr14:72922400-72924400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr14:72922600-72924200	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr14:72923400-72924400	Weak transcription	Esophagus	oesophagus
18	chr14:72923800-72946200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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