Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11158956	0.86[ASN][1000 genomes]
rs11623104	0.80[ASN][1000 genomes]
rs11626915	0.82[ASN][1000 genomes]
rs12587980	0.90[JPT][hapmap]
rs12881810	1.00[CHB][hapmap];0.89[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2238180	0.95[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.92[TSI][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2238186	0.90[CEU][hapmap];0.86[JPT][hapmap]
rs2238187	0.90[CHB][hapmap];0.85[JPT][hapmap];0.87[ASN][1000 genomes]
rs2239272	0.81[TSI][hapmap]
rs2239277	0.84[TSI][hapmap]
rs3784045	0.85[CHB][hapmap];0.81[CHD][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs3784047	0.85[CHB][hapmap];0.81[CHD][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs3825714	0.86[ASN][1000 genomes]
rs4903016	0.84[CHB][hapmap];0.85[JPT][hapmap]
rs4903024	0.86[JPT][hapmap]
rs7153117	0.83[ASN][1000 genomes]
rs7156512	0.85[CHB][hapmap];0.81[CHD][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs758266	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs758267	0.84[CHB][hapmap];0.85[JPT][hapmap]
rs917428	0.92[GIH][hapmap];0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72918000-72930000	Weak transcription	Right Atrium	heart
2	chr14:72918200-72929000	Weak transcription	Brain Cingulate Gyrus	brain
3	chr14:72918200-72930000	Weak transcription	Left Ventricle	heart
4	chr14:72919000-72931400	Weak transcription	Adipose Nuclei	Adipose
5	chr14:72919400-72926800	Weak transcription	Fetal Intestine Small	intestine
6	chr14:72919400-72945200	Weak transcription	Brain Germinal Matrix	brain
7	chr14:72919800-72927400	Weak transcription	Fetal Muscle Leg	muscle
8	chr14:72923800-72946200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr14:72924200-72927400	Strong transcription	Cortex derived primary cultured neurospheres	brain
10	chr14:72924400-72927800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr14:72924800-72930000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr14:72924800-72930000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr14:72925200-72930000	Weak transcription	NH-A	brain
14	chr14:72925400-72930200	Weak transcription	NHLF	lung
15	chr14:72926000-72930000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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