Variant report

Variant rs12898620
Chromosome Location chr15:34874651-34874652
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34873200-34876600 Active TSS HSMMtube muscle
2 chr15:34873600-34876400 Active TSS Pancreas Pancrea
3 chr15:34873800-34874800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr15:34873800-34875000 Flanking Active TSS Brain Inferior Temporal Lobe brain
5 chr15:34873800-34875200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
6 chr15:34873800-34875200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr15:34873800-34876800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr15:34873800-34876800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr15:34874000-34874800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
10 chr15:34874000-34874800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr15:34874000-34874800 Enhancers Primary hematopoietic stem cells blood
12 chr15:34874000-34874800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
13 chr15:34874000-34874800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
14 chr15:34874000-34874800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
15 chr15:34874000-34874800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr15:34874000-34874800 Enhancers Small Intestine intestine
17 chr15:34874000-34875000 Flanking Active TSS Fetal Brain Female brain
18 chr15:34874000-34875200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
19 chr15:34874000-34875800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr15:34874000-34876400 Active TSS Left Ventricle heart
21 chr15:34874000-34876800 Active TSS Pancreatic Islets Pancreatic Islet
22 chr15:34874200-34874800 Flanking Active TSS A549 lung
23 chr15:34874200-34875200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
24 chr15:34874200-34875200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr15:34874200-34875200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr15:34874200-34875200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
27 chr15:34874200-34875600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr15:34874200-34876000 Active TSS HUES48 Cell Line embryonic stem cell
29 chr15:34874200-34876000 Active TSS HUES64 Cell Line embryonic stem cell
30 chr15:34874200-34876400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr15:34874200-34876400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
32 chr15:34874200-34877000 Active TSS HepG2 liver
33 chr15:34874200-34877000 Active TSS HSMM muscle
34 chr15:34874400-34874800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:34874400-34874800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr15:34874400-34874800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
37 chr15:34874400-34874800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
38 chr15:34874400-34874800 Flanking Active TSS Brain Hippocampus Middle brain
39 chr15:34874400-34874800 Flanking Active TSS Colon Smooth Muscle Colon
40 chr15:34874400-34874800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
41 chr15:34874400-34875000 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr15:34874400-34875000 Flanking Active TSS Brain Cingulate Gyrus brain
43 chr15:34874400-34875000 Flanking Active TSS Duodenum Mucosa Duodenum
44 chr15:34874400-34875200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
45 chr15:34874400-34875200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
46 chr15:34874400-34875200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
47 chr15:34874400-34875400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
48 chr15:34874400-34876200 Active TSS ES-I3 Cell Line embryonic stem cell
49 chr15:34874400-34876400 Active TSS H9 Cell Line embryonic stem cell
50 chr15:34874400-34876400 Active TSS GM12878-XiMat blood

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