The 2.0 version of rSNPBase

Variant report

Variant rs12901298
Chromosome Location chr15:77723834-77723835
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77714000-77726400 Weak transcription Small Intestine intestine
2 chr15:77714000-77727600 Weak transcription Left Ventricle heart
3 chr15:77714000-77748600 Weak transcription Placenta Placenta
4 chr15:77714400-77732400 Weak transcription HSMM muscle
5 chr15:77714400-77732800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr15:77714400-77739200 Weak transcription Right Atrium heart
7 chr15:77714400-77741600 Weak transcription Fetal Thymus thymus
8 chr15:77714600-77727400 Weak transcription Muscle Satellite Cultured Cells --
9 chr15:77714600-77732800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr15:77714600-77734400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr15:77714800-77739200 Weak transcription Fetal Intestine Small intestine
12 chr15:77715000-77740600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr15:77715400-77733800 Weak transcription Primary hematopoietic stem cells blood
14 chr15:77715400-77737800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr15:77716000-77733800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr15:77716200-77730200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:77716400-77734200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr15:77716400-77741400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr15:77716800-77738000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr15:77716800-77742600 Weak transcription Hela-S3 cervix
21 chr15:77717000-77728400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr15:77717000-77732800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr15:77717000-77754400 Weak transcription K562 blood
24 chr15:77717200-77739400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr15:77717800-77725400 Weak transcription Psoas Muscle Psoas
26 chr15:77717800-77726400 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr15:77717800-77732600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr15:77718800-77732000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr15:77719800-77729000 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr15:77720000-77739400 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr15:77720200-77743000 Weak transcription Primary B cells from cord blood blood
32 chr15:77720800-77729000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr15:77721200-77729000 Weak transcription Primary B cells from peripheral blood blood
34 chr15:77723000-77728600 Weak transcription Brain Angular Gyrus brain
35 chr15:77723200-77725000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr15:77723200-77728000 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr15:77723200-77729200 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr15:77723200-77738000 Weak transcription Right Ventricle heart
39 chr15:77723400-77728000 Weak transcription Primary T cells from cord blood blood
40 chr15:77723400-77729000 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr15:77723600-77728000 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015