Variant report

No.	Distal block	Cell Line	Cell type
1	chr15:82313123..82316387-chr15:82317939..82321630,4	K562	blood:
2	chr15:82319110..82321365-chr15:82323956..82326070,2	K562	blood:
3	chr15:82313752..82316184-chr15:82319233..82321630,2	K562	blood:
4	chr15:82319183..82322755-chr15:82336037..82338445,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000222521	Chromatin interaction

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11853590	0.80[EUR][1000 genomes]
rs12902907	0.91[CEU][hapmap];0.86[MEX][hapmap];0.94[TSI][hapmap];0.91[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12916537	0.86[ASW][hapmap]
rs17354185	1.00[ASN][1000 genomes]
rs28876157	1.00[ASN][1000 genomes]
rs34088129	1.00[ASN][1000 genomes]
rs34341037	1.00[ASN][1000 genomes]
rs34593711	0.89[EUR][1000 genomes]
rs34913882	0.89[EUR][1000 genomes]
rs34922061	1.00[ASN][1000 genomes]
rs35573193	0.89[EUR][1000 genomes]
rs4325512	0.91[CEU][hapmap];0.89[EUR][1000 genomes]
rs4778665	1.00[ASN][1000 genomes]
rs62011975	1.00[ASN][1000 genomes]
rs62012003	1.00[ASN][1000 genomes]
rs62012004	1.00[ASN][1000 genomes]
rs62012005	1.00[ASN][1000 genomes]
rs62012010	1.00[ASN][1000 genomes]
rs62012011	1.00[ASN][1000 genomes]
rs62012043	1.00[ASN][1000 genomes]
rs62012046	1.00[ASN][1000 genomes]
rs62012047	1.00[ASN][1000 genomes]
rs62012049	1.00[ASN][1000 genomes]
rs67548148	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67817019	0.85[EUR][1000 genomes]
rs67824562	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67984036	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7162970	0.89[EUR][1000 genomes]
rs7171792	0.91[CEU][hapmap];0.86[MEX][hapmap]
rs8031443	0.90[CEU][hapmap];0.82[YRI][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833067	chr15:82234980-82450485	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	esv2422504	chr15:82293064-82426400	Strong transcription Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:82308200-82331600	Weak transcription	Fetal Brain Female	brain

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