| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1044277 |
chr15:49921547-50702386 |
Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
107 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv542380 |
chr15:49921547-50702386 |
Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
107 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv833003 |
chr15:50100372-50273309 |
ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1035983 |
chr15:50223334-50595170 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv542382 |
chr15:50223334-50595170 |
Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv904204 |
chr15:50223697-50273670 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv904205 |
chr15:50228476-50286981 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
