Variant report

Variant	rs12925766
Chromosome Location	chr7:130319331-130319332
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10083751	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2288045	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3094447	0.96[EUR][1000 genomes]
rs3094448	0.96[EUR][1000 genomes]
rs3094451	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3094458	0.96[EUR][1000 genomes]
rs3096372	0.96[EUR][1000 genomes]
rs3096373	0.96[EUR][1000 genomes]
rs3096375	0.96[EUR][1000 genomes]
rs3096378	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3096380	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3114640	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3114642	0.96[EUR][1000 genomes]
rs4238976	0.89[AMR][1000 genomes]
rs4558424	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4627358	0.83[AMR][1000 genomes]
rs8052756	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8057396	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:130281000-130322600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr7:130281000-130345600	Weak transcription	Brain Angular Gyrus	brain
3	chr7:130298200-130345000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr7:130298400-130345600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr7:130300200-130345000	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr7:130300800-130322600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr7:130300800-130323000	Weak transcription	Ovary	ovary
8	chr7:130300800-130324600	Weak transcription	Left Ventricle	heart
9	chr7:130300800-130345200	Weak transcription	Brain Anterior Caudate	brain
10	chr7:130307800-130324400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr7:130308200-130330000	Weak transcription	Right Ventricle	heart
12	chr7:130317600-130322600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr7:130317600-130326400	Weak transcription	HSMM	muscle
14	chr7:130317600-130334000	Weak transcription	Osteobl	bone
15	chr7:130317600-130336800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr7:130317600-130352400	Weak transcription	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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