Variant report

Variant	rs1292747
Chromosome Location	chr21:16115679-16115680
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1011867	0.85[JPT][hapmap]
rs1292738	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1292746	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13050255	0.86[CHB][hapmap]
rs2822873	0.86[CHB][hapmap]
rs2822874	0.86[CHB][hapmap]
rs2822875	0.86[CHB][hapmap]
rs2822877	0.86[CHB][hapmap]
rs2822878	0.86[CHB][hapmap]
rs2822883	0.86[CHB][hapmap]
rs2822884	0.86[CHB][hapmap]
rs2822886	0.86[CHB][hapmap]
rs8132570	0.86[CHB][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs1292747	EVC	trans	lymphoblastoid	seeQTL
rs1292747	SAMSN1	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16115200-16115800	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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