Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:43957178..43959632-chr18:43963115..43964870,2	K562	blood:

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12607419	1.00[JPT][hapmap]
rs12607488	0.95[JPT][hapmap]
rs2053957	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2886344	0.95[JPT][hapmap]
rs34543105	0.82[ASN][1000 genomes]
rs3861807	0.89[YRI][hapmap]
rs60703536	0.82[ASN][1000 genomes]
rs8085058	0.87[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9962451	0.90[CHB][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv576812	chr18:43946837-43976847	Genic enhancers Weak transcription Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:43939400-43966800	Weak transcription	Right Ventricle	heart
2	chr18:43939400-43976600	Weak transcription	Hela-S3	cervix
3	chr18:43949400-43972600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr18:43953400-43965200	Weak transcription	Esophagus	oesophagus
5	chr18:43953400-43966600	Weak transcription	Right Atrium	heart
6	chr18:43954000-43965000	Weak transcription	Fetal Brain Female	brain
7	chr18:43954800-43966600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr18:43955000-43967000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr18:43955200-43964600	Weak transcription	Brain Germinal Matrix	brain
10	chr18:43955200-43967000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr18:43956200-43964800	Weak transcription	Spleen	Spleen
12	chr18:43956200-43965000	Weak transcription	Left Ventricle	heart
13	chr18:43956400-43978400	Weak transcription	Liver	Liver
14	chr18:43959200-43965400	Weak transcription	Fetal Muscle Trunk	muscle
15	chr18:43959400-43966200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr18:43963000-43965600	Weak transcription	Fetal Stomach	stomach
17	chr18:43963000-43972600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr18:43963800-43965000	Weak transcription	Psoas Muscle	Psoas
19	chr18:43964000-43970400	Enhancers	Fetal Muscle Leg	muscle
20	chr18:43964400-43980800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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