The 2.0 version of rSNPBase

Variant report

Variant rs12974446
Chromosome Location chr19:37104688-37104689
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37096800-37110000 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:37097000-37106000 Weak transcription Fetal Thymus thymus
3 chr19:37097000-37106800 Weak transcription Stomach Mucosa stomach
4 chr19:37097000-37107000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr19:37097000-37107000 Weak transcription Small Intestine intestine
6 chr19:37097000-37107400 Weak transcription HUVEC blood vessel
7 chr19:37097000-37107800 Weak transcription Gastric stomach
8 chr19:37097000-37112600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr19:37097200-37104800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr19:37097200-37105600 Weak transcription H1 Cell Line embryonic stem cell
11 chr19:37097200-37109600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr19:37097200-37110000 Weak transcription NHLF lung
13 chr19:37097400-37105200 Weak transcription HepG2 liver
14 chr19:37098000-37106200 Strong transcription Brain Hippocampus Middle brain
15 chr19:37098000-37118200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr19:37098000-37156000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:37098200-37108400 Strong transcription Brain Inferior Temporal Lobe brain
18 chr19:37098200-37120400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:37098400-37105000 ZNF genes & repeats Liver Liver
20 chr19:37098400-37107400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr19:37098600-37105200 Strong transcription Fetal Muscle Trunk muscle
22 chr19:37098600-37105600 Strong transcription Brain Angular Gyrus brain
23 chr19:37098600-37106200 Strong transcription Ovary ovary
24 chr19:37098800-37105000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr19:37098800-37106000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr19:37098800-37108200 Strong transcription Primary T helper naive cells fromperipheralblood blood
27 chr19:37099000-37105600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr19:37099000-37109200 Strong transcription Dnd41 blood
29 chr19:37099200-37105800 Strong transcription Stomach Smooth Muscle stomach
30 chr19:37099200-37110000 Strong transcription Brain Cingulate Gyrus brain
31 chr19:37099600-37105800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:37099600-37108400 Strong transcription Fetal Muscle Leg muscle
33 chr19:37100200-37107600 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr19:37100800-37105000 Strong transcription Primary B cells from peripheral blood blood
35 chr19:37101000-37107000 Weak transcription Aorta Aorta
36 chr19:37101000-37107000 Weak transcription Pancreas Pancrea
37 chr19:37101000-37107000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr19:37101400-37112800 Weak transcription Osteobl bone
39 chr19:37101800-37111000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr19:37102000-37105200 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr19:37102000-37105600 Weak transcription Left Ventricle heart
42 chr19:37102000-37105600 Weak transcription Psoas Muscle Psoas
43 chr19:37102000-37106800 Weak transcription HSMMtube muscle
44 chr19:37102000-37118600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
45 chr19:37102200-37135200 ZNF genes & repeats Fetal Brain Female brain
46 chr19:37102800-37107000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr19:37103000-37106000 ZNF genes & repeats Primary T cells from cord blood blood
48 chr19:37103000-37118600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
49 chr19:37103200-37105200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
50 chr19:37103200-37106400 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015