Variant report

Variant rs12979640
Chromosome Location chr19:38179156-38179157
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38166600-38182600 Weak transcription Right Ventricle heart
2 chr19:38166800-38180000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:38169800-38182200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr19:38170400-38182200 Weak transcription Brain Substantia Nigra brain
5 chr19:38170600-38182200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr19:38170800-38182200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr19:38171400-38182200 Weak transcription Brain Angular Gyrus brain
8 chr19:38172800-38182200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr19:38173600-38182800 Weak transcription Placenta Amnion Placenta Amnion
10 chr19:38173800-38180400 Weak transcription Dnd41 blood
11 chr19:38173800-38182200 Weak transcription Brain Inferior Temporal Lobe brain
12 chr19:38173800-38182200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr19:38174600-38182200 Weak transcription Colon Smooth Muscle Colon
14 chr19:38175000-38182400 Weak transcription Fetal Muscle Trunk muscle
15 chr19:38175200-38179400 Weak transcription Fetal Stomach stomach
16 chr19:38175200-38182400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr19:38175800-38182200 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr19:38176400-38179800 ZNF genes & repeats Fetal Brain Female brain
19 chr19:38176400-38180400 Weak transcription Fetal Brain Male brain
20 chr19:38176400-38182200 Weak transcription Muscle Satellite Cultured Cells --
21 chr19:38176400-38182400 Weak transcription Aorta Aorta
22 chr19:38176800-38182200 Weak transcription Fetal Lung lung
23 chr19:38177000-38179800 ZNF genes & repeats Brain Germinal Matrix brain
24 chr19:38177200-38179400 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
25 chr19:38177400-38182200 Weak transcription Stomach Smooth Muscle stomach
26 chr19:38177400-38182200 Weak transcription HepG2 liver
27 chr19:38177600-38182200 Weak transcription Psoas Muscle Psoas
28 chr19:38177600-38182600 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr19:38177600-38182800 Weak transcription Gastric stomach
30 chr19:38177800-38182200 Weak transcription Adipose Nuclei Adipose
31 chr19:38177800-38182200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr19:38177800-38182400 Weak transcription Primary T cells from cord blood blood
33 chr19:38178000-38182400 Weak transcription Ovary ovary
34 chr19:38178200-38182200 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr19:38178200-38182200 Weak transcription Brain Anterior Caudate brain
36 chr19:38178600-38180800 Strong transcription Left Ventricle heart
37 chr19:38178600-38182200 Weak transcription Brain Cingulate Gyrus brain
38 chr19:38178800-38179800 ZNF genes & repeats Liver Liver
39 chr19:38178800-38181000 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr19:38179000-38179200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
41 chr19:38179000-38179600 Strong transcription Brain Hippocampus Middle brain
42 chr19:38179000-38182200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr19:38179000-38182400 Weak transcription Primary T helper naive cells from peripheral blood blood

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