The 2.0 version of rSNPBase

Variant report

Variant rs12984991
Chromosome Location chr19:18840669-18840670
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18812000-18844200 Weak transcription Fetal Kidney kidney
2 chr19:18819000-18844000 Weak transcription H1 Cell Line embryonic stem cell
3 chr19:18820400-18847200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr19:18820600-18846600 Weak transcription Esophagus oesophagus
5 chr19:18821200-18844000 Weak transcription Colonic Mucosa Colon
6 chr19:18821200-18860600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr19:18821200-18861000 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr19:18821200-18864800 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr19:18822600-18843800 Weak transcription Colon Smooth Muscle Colon
10 chr19:18822600-18844000 Weak transcription NHLF lung
11 chr19:18824200-18846600 Weak transcription Pancreas Pancrea
12 chr19:18824600-18843000 Weak transcription Fetal Lung lung
13 chr19:18824600-18847800 Weak transcription Liver Liver
14 chr19:18825000-18844000 Weak transcription Right Atrium heart
15 chr19:18825000-18845600 Weak transcription Primary B cells from cord blood blood
16 chr19:18826400-18840800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr19:18827000-18846200 Weak transcription Thymus Thymus
18 chr19:18827600-18860600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr19:18828000-18841200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr19:18828000-18841400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr19:18828200-18845600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr19:18828400-18841400 Weak transcription Spleen Spleen
23 chr19:18828800-18850400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr19:18829000-18842200 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr19:18829000-18843800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr19:18829200-18842000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr19:18829200-18860000 Weak transcription Primary monocytes fromperipheralblood blood
28 chr19:18829200-18861400 Weak transcription Primary T cells fromperipheralblood blood
29 chr19:18829400-18841000 Strong transcription Fetal Intestine Small intestine
30 chr19:18829400-18841400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr19:18829400-18842000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr19:18830400-18845600 Weak transcription Brain Hippocampus Middle brain
33 chr19:18830400-18845800 Weak transcription Brain Cingulate Gyrus brain
34 chr19:18830600-18844000 Weak transcription Right Ventricle heart
35 chr19:18830600-18844000 Weak transcription Osteobl bone
36 chr19:18830800-18842400 Weak transcription Left Ventricle heart
37 chr19:18830800-18845800 Weak transcription Brain Inferior Temporal Lobe brain
38 chr19:18832000-18843800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr19:18833600-18841200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr19:18833600-18841800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr19:18833600-18841800 Weak transcription Duodenum Mucosa Duodenum
42 chr19:18833600-18843000 Weak transcription Brain Substantia Nigra brain
43 chr19:18833600-18843600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr19:18833600-18844000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr19:18833600-18844200 Weak transcription HSMM muscle
46 chr19:18833800-18853400 Weak transcription Primary T cells from cord blood blood
47 chr19:18833800-18860400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr19:18833800-18860800 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr19:18834600-18843200 Weak transcription Stomach Smooth Muscle stomach
50 chr19:18834600-18845800 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015