The 2.0 version of rSNPBase

Variant report

Variant rs4808154
Chromosome Location chr19:18843752-18843753
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18812000-18844200 Weak transcription Fetal Kidney kidney
2 chr19:18819000-18844000 Weak transcription H1 Cell Line embryonic stem cell
3 chr19:18820400-18847200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr19:18820600-18846600 Weak transcription Esophagus oesophagus
5 chr19:18821200-18844000 Weak transcription Colonic Mucosa Colon
6 chr19:18821200-18860600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr19:18821200-18861000 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr19:18821200-18864800 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr19:18822600-18843800 Weak transcription Colon Smooth Muscle Colon
10 chr19:18822600-18844000 Weak transcription NHLF lung
11 chr19:18824200-18846600 Weak transcription Pancreas Pancrea
12 chr19:18824600-18847800 Weak transcription Liver Liver
13 chr19:18825000-18844000 Weak transcription Right Atrium heart
14 chr19:18825000-18845600 Weak transcription Primary B cells from cord blood blood
15 chr19:18827000-18846200 Weak transcription Thymus Thymus
16 chr19:18827600-18860600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr19:18828200-18845600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr19:18828800-18850400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:18829000-18843800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr19:18829200-18860000 Weak transcription Primary monocytes fromperipheralblood blood
21 chr19:18829200-18861400 Weak transcription Primary T cells fromperipheralblood blood
22 chr19:18830400-18845600 Weak transcription Brain Hippocampus Middle brain
23 chr19:18830400-18845800 Weak transcription Brain Cingulate Gyrus brain
24 chr19:18830600-18844000 Weak transcription Right Ventricle heart
25 chr19:18830600-18844000 Weak transcription Osteobl bone
26 chr19:18830800-18845800 Weak transcription Brain Inferior Temporal Lobe brain
27 chr19:18832000-18843800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr19:18833600-18844000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr19:18833600-18844200 Weak transcription HSMM muscle
30 chr19:18833800-18853400 Weak transcription Primary T cells from cord blood blood
31 chr19:18833800-18860400 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr19:18833800-18860800 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr19:18834600-18845800 Weak transcription Brain Anterior Caudate brain
34 chr19:18835000-18844000 Weak transcription Lung lung
35 chr19:18835000-18860600 Weak transcription Primary B cells from peripheral blood blood
36 chr19:18835200-18853200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr19:18836000-18843800 Weak transcription Brain Germinal Matrix brain
38 chr19:18836800-18845200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr19:18837000-18843800 Weak transcription Fetal Thymus thymus
40 chr19:18837400-18844000 Weak transcription Fetal Brain Female brain
41 chr19:18838000-18844000 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr19:18838200-18844000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr19:18841000-18844800 Genic enhancers Fetal Intestine Small intestine
44 chr19:18841000-18845600 Enhancers Fetal Intestine Large intestine
45 chr19:18841200-18845000 Enhancers HepG2 liver
46 chr19:18841200-18852000 Weak transcription Small Intestine intestine
47 chr19:18841600-18845800 Weak transcription Spleen Spleen
48 chr19:18841800-18844000 Weak transcription Muscle Satellite Cultured Cells --
49 chr19:18842000-18844000 Weak transcription Rectal Smooth Muscle rectum
50 chr19:18842000-18848400 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015