The 2.0 version of rSNPBase

Variant report

Variant rs56182405
Chromosome Location chr19:18852847-18852848
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18821200-18860600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr19:18821200-18861000 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr19:18821200-18864800 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr19:18827600-18860600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr19:18829200-18860000 Weak transcription Primary monocytes fromperipheralblood blood
6 chr19:18829200-18861400 Weak transcription Primary T cells fromperipheralblood blood
7 chr19:18833800-18853400 Weak transcription Primary T cells from cord blood blood
8 chr19:18833800-18860400 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr19:18833800-18860800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr19:18835000-18860600 Weak transcription Primary B cells from peripheral blood blood
11 chr19:18835200-18853200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr19:18842200-18853400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr19:18842600-18853400 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr19:18842800-18856600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr19:18842800-18861000 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr19:18843000-18860600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:18844200-18872800 Weak transcription Muscle Satellite Cultured Cells --
18 chr19:18844400-18859800 Weak transcription Fetal Brain Female brain
19 chr19:18844400-18867400 Weak transcription HSMMtube muscle
20 chr19:18844600-18860600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr19:18844600-18872800 Weak transcription NH-A brain
22 chr19:18844800-18871800 Weak transcription Rectal Smooth Muscle rectum
23 chr19:18845600-18854200 Weak transcription NHLF lung
24 chr19:18846000-18864200 Weak transcription Primary B cells from cord blood blood
25 chr19:18846600-18855000 Enhancers Fetal Intestine Large intestine
26 chr19:18846800-18856800 Weak transcription Brain Germinal Matrix brain
27 chr19:18846800-18871600 Weak transcription Fetal Brain Male brain
28 chr19:18846800-18872400 Weak transcription Colon Smooth Muscle Colon
29 chr19:18848000-18855600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr19:18848000-18860400 Weak transcription Brain Angular Gyrus brain
31 chr19:18848600-18856800 Weak transcription Fetal Kidney kidney
32 chr19:18848600-18860600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr19:18849200-18873000 Weak transcription Psoas Muscle Psoas
34 chr19:18849400-18860600 Weak transcription Liver Liver
35 chr19:18849800-18858200 Genic enhancers Fetal Intestine Small intestine
36 chr19:18850200-18853200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr19:18850600-18860800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr19:18850800-18854600 Enhancers Pancreas Pancrea
39 chr19:18850800-18867400 Weak transcription Thymus Thymus
40 chr19:18851000-18854400 Enhancers Sigmoid Colon Sigmoid Colon
41 chr19:18851000-18854600 Enhancers Right Ventricle heart
42 chr19:18851000-18854800 Enhancers Gastric stomach
43 chr19:18851200-18853200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr19:18851200-18855000 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr19:18851400-18853000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr19:18851400-18853800 Enhancers Fetal Stomach stomach
47 chr19:18851600-18853800 Bivalent Enhancer Fetal Muscle Trunk muscle
48 chr19:18851800-18853800 Enhancers Stomach Smooth Muscle stomach
49 chr19:18851800-18854400 Enhancers Lung lung
50 chr19:18851800-18854600 Enhancers Right Atrium heart

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Last update: Aug 31, 2015