The 2.0 version of rSNPBase

Variant report

Variant rs12989455
Chromosome Location chr2:210889961-210889962
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:210868000-210920000 Weak transcription Spleen Spleen
2 chr2:210868400-210899000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:210869400-210891400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:210870800-210890000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr2:210871000-210893800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr2:210871200-210893000 Strong transcription Dnd41 blood
7 chr2:210871200-210893200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr2:210871200-210911400 Weak transcription Psoas Muscle Psoas
9 chr2:210871600-210891800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr2:210871800-210890600 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr2:210872400-210890000 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr2:210872400-210893800 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr2:210872600-210891400 Strong transcription Fetal Thymus thymus
14 chr2:210872600-210907600 Weak transcription Stomach Mucosa stomach
15 chr2:210872800-210890800 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr2:210872800-210894200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr2:210873000-210890200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr2:210873000-210893800 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr2:210873400-210891600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr2:210873600-210891400 Strong transcription HUES6 Cell Line embryonic stem cell
21 chr2:210874000-210890000 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr2:210874000-210920800 Weak transcription Fetal Heart heart
23 chr2:210874200-210893800 Strong transcription Primary monocytes fromperipheralblood blood
24 chr2:210874400-210891400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr2:210874600-210890800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:210875000-210893200 Strong transcription Liver Liver
27 chr2:210875800-210890000 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr2:210875800-210891200 Strong transcription HSMM muscle
29 chr2:210875800-210891400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:210876000-210891000 Strong transcription Placenta Placenta
31 chr2:210877200-210891400 Strong transcription Adipose Nuclei Adipose
32 chr2:210878200-210891000 Strong transcription Skeletal Muscle Female skeletal muscle
33 chr2:210878400-210890400 Strong transcription Osteobl bone
34 chr2:210878600-210890800 Strong transcription Primary T cells fromperipheralblood blood
35 chr2:210878600-210891800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr2:210879000-210890200 Strong transcription Fetal Intestine Large intestine
37 chr2:210879000-210891200 Strong transcription iPS-20b Cell Line embryonic stem cell
38 chr2:210879400-210890000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:210879400-210894200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:210879600-210890200 Strong transcription HUVEC blood vessel
41 chr2:210879600-210891400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:210880200-210896200 Weak transcription K562 blood
43 chr2:210880800-210890600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr2:210881800-210890800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr2:210881800-210892800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr2:210881800-210892800 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr2:210881800-210953000 Weak transcription Gastric stomach
48 chr2:210882000-210890200 Strong transcription Brain Anterior Caudate brain
49 chr2:210882000-210891200 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr2:210882400-210911400 Weak transcription Esophagus oesophagus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015